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FelixErnst/README.md

Github stats

R/Bioc contributions

Microbiome

Package BioC-devel BioC-release GitHub
mia
miaViz

RNA modifications

Package BioC-devel BioC-release GitHub
Modstrings
RNAmodR
RNAmodR.RiboMethSeq
RNAmodR.AlkAnilineSeq
EpiTxDb
EpiTxDb.Hs.hg38
EpiTxDb.Ms.mm10
EpiTxDb.Sc.sacCer3

tRNA

Package BioC-devel BioC-release GitHub
tRNA
tRNAscanImport
tRNAdbImport

Others

Package BioC-devel BioC-release GitHub
Structstrings

Other packages involved in

Package BioC-devel BioC-release GitHub
TreeSummarizedExperiment

R contributions as a Maintainer

Package CRAN GitHub
ROCR

Pinned Loading

  1. RNAmodR RNAmodR Public

    📦 RNAmodR: detection of post-transcriptional RNA modifications based on HTS data

    R 3

  2. Modstrings Modstrings Public

    📦 Modstrings: implementation of Biostrings to work with nucleotide sequences containing modified nucleotides.

    R 1 1

  3. tRNA tRNA Public

    📦 tRNA: Analyzing tRNA sequences and structures

    R 1

  4. Structstrings Structstrings Public

    📦 Structstrings: implementation of Biostrings to work with dot bracket annotations

    R 4

  5. EpiTxDb EpiTxDb Public

    📦 EpiTxDb: storing and accessing epitranscriptomic information using the AnnotationDbi interface

    R