CI #60
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - "src/**" | |
| - "tests/**" | |
| - "pyproject.toml" | |
| - "poetry.toml" | |
| - "poetry.lock" | |
| - "!**.md" | |
| - "!.github/workflows/docs.yml" | |
| pull_request: | |
| paths-ignore: | |
| - "**.md" | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| test: | |
| strategy: | |
| fail-fast: false # run all configs, avoid breaking when one fails | |
| matrix: | |
| os: ["ubuntu-latest", "macos-latest"] | |
| python-version: ["3.7", "3.8", "3.9"] | |
| r-version: ["release"] | |
| runs-on: ${{ matrix.os }} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - name: Checkout project | |
| uses: actions/checkout@v3 | |
| - name: Install Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Install spatstat subpackages and extensions | |
| run: | |
| Rscript -e 'install.packages(c("spatstat.explore", "spatstat.geom"))' | |
| # https://github.com/spatstat/spatstat | |
| - name: Install Poetry | |
| uses: snok/install-poetry@v1 | |
| # with: | |
| # virtualenvs-create: true | |
| # virtualenvs-in-project: true | |
| - name: Load cached venv | |
| id: cached-poetry-dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: .venv | |
| key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }} | |
| - name: Install package with main (non-optional) and dev dependencies | |
| # see [tool.poetry.dependencies] and [tool.poetry.dev-dependencies] | |
| # in pyproject.toml | |
| if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' | |
| run: poetry install --no-root | |
| - name: Install package | |
| run: poetry install | |
| - name: Test with pytest | |
| # Configuration of pytest [tool.pytest.ini_options] in pyproject.toml | |
| # https://docs.pytest.org/en/latest/reference/customize.html#pyproject-toml | |
| run: poetry run pytest --cov-report=xml | |
| - name: Upload coverage to Codecov | |
| # https://docs.codecov.com/docs | |
| # https://github.com/codecov/codecov-action | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: ./coverage.xml | |
| # generated using --cov-report=xml in Test with pytest |