Run ingest-pangoLineageAliases #398
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| name: Run ingest-pangoLineageAliases | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: | |
| paths: | |
| - 'ext_models/ingest-pangoLineageAliases/**' | |
| schedule: | |
| - cron: '30 6 * * *' | |
| env: | |
| IMAGE_NAME: ghcr.io/cevo-public/cov-spectrum-server | |
| jobs: | |
| docker: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Run program | |
| run: | | |
| docker run \ | |
| -e DB_HOST=${{ secrets.INGEST_PANGO_ALIAS_DB_HOST }} \ | |
| -e DB_PORT=${{ secrets.INGEST_PANGO_ALIAS_DB_PORT }} \ | |
| -e DB_NAME=${{ secrets.INGEST_PANGO_ALIAS_DB_NAME }} \ | |
| -e DB_USER=${{ secrets.INGEST_PANGO_ALIAS_DB_USER }} \ | |
| -e DB_PASSWORD=${{ secrets.INGEST_PANGO_ALIAS_DB_PASSWORD }} \ | |
| -e NOTIFICATION_KEY=${{ secrets.INGEST_PANGO_ALIAS_NOTIFICATION }} \ | |
| ghcr.io/cevo-public/cov-spectrum-ingest-pangolineagealiases:br-move-database |