My codes of the Coursera's course named "Biology Meets Programming: Bioinformatics for Beginners" are in this repository.
These files are for the first week 😊 :
- hidden_messages_dictionary.py
- ReverseComplement.py
- PatternMatching.py
- PatternInRegion.py
These files are for the second week 😄 :
- SymbolArray.py
- SkewArray.py
- HammingDistance.py
- ApproximatePatternMatching.py
These files are for the third week 😬 :
- Motifs.py
- Consensus.py
- Score.py
- probability.py
- ProfileMostProbablePattern.py
- GreedyMotifSearch.py
These files are for the fourth week 😍 :
- RandomizedMotifSearch.py
- Motif_Week4.py
- Normalize.py
- RandomizedMotifSearch.py
- ProfileGeneratedString.py
- RandomMotifs.py
- GibbsSampler.py
Laplace’s Rule of Succession is used for CountWithPseudocounts function.
RandomizedMotifSearch has the advantage of being able to find longer motifs.
Just don't forget to be happy 😉