bugfix

GreenleafLab · Nov 16, 2020 · 46b519f · 46b519f
1 parent b6b4210
commit 46b519f
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diff --git a/.DS_Store b/.DS_Store
diff --git a/R/MatrixGeneExpression.R b/R/MatrixGeneExpression.R
@@ -73,7 +73,7 @@ addGeneExpressionMatrix <- function(
   .logMessage("Overlap Per Sample w/ scATAC : ", paste(paste(names(overlapPerSample), round(overlapPerSample,3), sep = "="), collapse=","), logFile = logFile, verbose = TRUE)
 
   #Get QC Info
-  assay(se) <- Matrix::Matrix(assay(se), sparse=TRUE)
+  assay(seRNA) <- Matrix::Matrix(assay(seRNA), sparse=TRUE)
   nUMI <- Matrix::colSums(assay(seRNA))
   mb <- assay(seRNA)
   mb@x[mb@x > 0] <- 1