Hi, I'm an evolutionary biologist who does mostly molecular phylogenetics. Find me on ecoevo.social.
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wikipedia2phylo
wikipedia2phylo PublicConvert html phylogenetic trees from a wikipedia article into a standard bioinformatics format.
Python
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Species_markovi
Species_markovi PublicGenerate random species names (or any fixed-length sequence of words).
Python
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Scientific2CommonName
Scientific2CommonName PublicConvert species scientific names to common names (english), and other useful taxonomic queries, using the NCBI taxonomy
Python
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ape_chronos_customized
ape_chronos_customized PublicCustom changes to the chronos dating function from APE package (Analysis of Phylogenetics and Evolution)
R
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