1 12 Merges from develop (#421)

* OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return * Merges from develop #358 patches from vtk #361 fix header guard spelling * Remove case statement for H5I_EVENTSET * Correct call with versioning * Remove tabs * Double underscore change * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings Remove more underscores from header guards
HDFGroup · Mar 4, 2021 · 13c706d · 13c706d
1 parent 0f219ca
commit 13c706d
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Showing 98 changed files with 364 additions and 355 deletions.
diff --git a/c++/src/H5AbstractDs.h b/c++/src/H5AbstractDs.h
@@ -12,8 +12,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef __AbstractDs_H
-#define __AbstractDs_H
+#ifndef AbstractDs_H
+#define AbstractDs_H
 
 namespace H5 {
 
@@ -81,4 +81,4 @@ class H5_DLLCPP AbstractDs {
 }; // end of AbstractDs
 } // namespace H5
 
-#endif // __AbstractDs_H
+#endif // AbstractDs_H
diff --git a/c++/src/H5CommonFG.h b/c++/src/H5CommonFG.h
@@ -12,8 +12,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef __CommonFG_H
-#define __CommonFG_H
+#ifndef CommonFG_H
+#define CommonFG_H
 
 namespace H5 {
 
@@ -83,7 +83,7 @@ class H5_DLLCPP CommonFG {
 }; // end of CommonFG
 } // namespace H5
 
-#endif // __CommonFG_H
+#endif // CommonFG_H
 
 /***************************************************************************
                                 Design Note

diff --git a/c++/src/H5Group.h b/c++/src/H5Group.h
@@ -12,8 +12,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef __Group_H
-#define __Group_H
+#ifndef Group_H
+#define Group_H
 
 namespace H5 {
 
@@ -83,4 +83,4 @@ class H5_DLLCPP Group : public H5Object, public CommonFG {
 }; // end of Group
 } // namespace H5
 
-#endif // __Group_H
+#endif // Group_H
diff --git a/c++/src/H5IdComponent.h b/c++/src/H5IdComponent.h
@@ -12,8 +12,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef __IdComponent_H
-#define __IdComponent_H
+#ifndef IdComponent_H
+#define IdComponent_H
 
 namespace H5 {
 
@@ -113,4 +113,4 @@ class H5_DLLCPP IdComponent {
 }; // end class IdComponent
 } // namespace H5
 
-#endif // __IdComponent_H
+#endif // IdComponent_H
diff --git a/config/gnu-cxxflags b/config/gnu-cxxflags
@@ -148,7 +148,7 @@ if test "X-g++" = "X-$cxx_vendor"; then
     # Enhanced Diagnostics #
     ########################
 
-    if test $cc_vers_major -ge 10; then
+    if test $cxx_vers_major -ge 10; then
         NO_DIAGS_CXXFLAGS="-fdiagnostics-urls=never -fno-diagnostics-color"
     fi
     DIAGS_CXXFLAGS=

diff --git a/config/gnu-fflags b/config/gnu-fflags
@@ -109,7 +109,7 @@ if test "X-gfortran" = "X-$f9x_vendor"; then
     # Enhanced Diagnostics #
     ########################
 
-    if test $cc_vers_major -ge 10; then
+    if test $f9x_vers_major -ge 10; then
         NO_DIAGS_FCFLAGS="-fdiagnostics-urls=never -fno-diagnostics-color"
     fi
     DIAGS_FCFLAGS=

diff --git a/fortran/src/H5match_types.c b/fortran/src/H5match_types.c
@@ -70,8 +70,8 @@ initCfile(void)
  * help@hdfgroup.org.                                                        *\n\
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */\n\
 \n\n\
-#ifndef _H5f90i_gen_H\n\
-#define _H5f90i_gen_H\n\
+#ifndef H5f90i_gen_H\n\
+#define H5f90i_gen_H\n\
 \n\
 /* This file is automatically generated by H5match_types.c at build time. */\n\
 \n\

diff --git a/java/src/jni/exceptionImp.h b/java/src/jni/exceptionImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_exception */
 
-#ifndef _Included_hdf_hdf5lib_H5_exception
-#define _Included_hdf_hdf5lib_H5_exception
+#ifndef Included_hdf_hdf5lib_H5_exception
+#define Included_hdf_hdf5lib_H5_exception
 
 #ifdef __cplusplus
 extern "C" {
@@ -67,4 +67,4 @@ JNIEXPORT jlong JNICALL Java_hdf_hdf5lib_exceptions_HDF5LibraryException__1getMi
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_exception */
+#endif /* Included_hdf_hdf5lib_H5_exception */
diff --git a/java/src/jni/h5Imp.h b/java/src/jni/h5Imp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5 */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5
-#define _Included_hdf_hdf5lib_H5_H5
+#ifndef Included_hdf_hdf5lib_H5_H5
+#define Included_hdf_hdf5lib_H5_H5
 
 #ifdef __cplusplus
 extern "C" {
@@ -82,4 +82,4 @@ JNIEXPORT jboolean JNICALL Java_hdf_hdf5lib_H5_H5is_1library_1threadsafe(JNIEnv
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5 */
+#endif /* Included_hdf_hdf5lib_H5_H5 */
diff --git a/java/src/jni/h5aImp.h b/java/src/jni/h5aImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5A */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5A
-#define _Included_hdf_hdf5lib_H5_H5A
+#ifndef Included_hdf_hdf5lib_H5_H5A
+#define Included_hdf_hdf5lib_H5_H5A
 
 #ifdef __cplusplus
 extern "C" {
@@ -375,4 +375,4 @@ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Aiterate_1by_1name(JNIEnv *, jclass
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5A */
+#endif /* Included_hdf_hdf5lib_H5_H5A */
diff --git a/java/src/jni/h5dImp.h b/java/src/jni/h5dImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5D */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5D
-#define _Included_hdf_hdf5lib_H5_H5D
+#ifndef Included_hdf_hdf5lib_H5_H5D
+#define Included_hdf_hdf5lib_H5_H5D
 
 #ifdef __cplusplus
 extern "C" {
@@ -322,4 +322,4 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5Drefresh(JNIEnv *, jclass, jlong);
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5D */
+#endif /* Included_hdf_hdf5lib_H5_H5D */
diff --git a/java/src/jni/h5eImp.h b/java/src/jni/h5eImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5E */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5E
-#define _Included_hdf_hdf5lib_H5_H5E
+#ifndef Included_hdf_hdf5lib_H5_H5E
+#define Included_hdf_hdf5lib_H5_H5E
 
 #ifdef __cplusplus
 extern "C" {
@@ -144,4 +144,4 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5Ewalk2(JNIEnv *, jclass, jlong, jlo
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5E */
+#endif /* Included_hdf_hdf5lib_H5_H5E */
diff --git a/java/src/jni/h5fImp.h b/java/src/jni/h5fImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5F */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5F
-#define _Included_hdf_hdf5lib_H5_H5F
+#ifndef Included_hdf_hdf5lib_H5_H5F
+#define Included_hdf_hdf5lib_H5_H5F
 
 #ifdef __cplusplus
 extern "C" {
@@ -236,4 +236,4 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5Fset_1libver_1bounds(JNIEnv *, jcla
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5F */
+#endif /* Included_hdf_hdf5lib_H5_H5F */
diff --git a/java/src/jni/h5gImp.h b/java/src/jni/h5gImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5G */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5G
-#define _Included_hdf_hdf5lib_H5_H5G
+#ifndef Included_hdf_hdf5lib_H5_H5G
+#define Included_hdf_hdf5lib_H5_H5G
 
 #ifdef __cplusplus
 extern "C" {
@@ -96,4 +96,4 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5Grefresh(JNIEnv *, jclass, jlong);
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5G */
+#endif /* Included_hdf_hdf5lib_H5_H5G */
diff --git a/java/src/jni/h5iImp.h b/java/src/jni/h5iImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5I */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5I
-#define _Included_hdf_hdf5lib_H5_H5I
+#ifndef Included_hdf_hdf5lib_H5_H5I
+#define Included_hdf_hdf5lib_H5_H5I
 
 #ifdef __cplusplus
 extern "C" {
@@ -130,4 +130,4 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5Idestroy_1type(JNIEnv *, jclass, ji
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5I */
+#endif /* Included_hdf_hdf5lib_H5_H5I */
diff --git a/java/src/jni/h5jni.h b/java/src/jni/h5jni.h
@@ -21,8 +21,8 @@
 #include <string.h>
 #include "H5private.h"
 
-#ifndef _Included_h5jni
-#define _Included_h5jni
+#ifndef Included_h5jni
+#define Included_h5jni
 
 #ifdef __cplusplus
 #define ENVPTR (env)
@@ -344,4 +344,4 @@ extern jobject create_H5O_token_t(JNIEnv *env, const H5O_token_t *token, hbool_t
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_h5jni */
+#endif /* Included_h5jni */
diff --git a/java/src/jni/h5lImp.h b/java/src/jni/h5lImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5_H5L */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5L
-#define _Included_hdf_hdf5lib_H5_H5L
+#ifndef Included_hdf_hdf5lib_H5_H5L
+#define Included_hdf_hdf5lib_H5_H5L
 
 #ifdef __cplusplus
 extern "C" {
@@ -170,4 +170,4 @@ JNIEXPORT void JNICALL Java_hdf_hdf5lib_H5_H5Lunregister(JNIEnv *, jclass, jint)
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5L */
+#endif /* Included_hdf_hdf5lib_H5_H5L */
diff --git a/java/src/jni/h5oImp.h b/java/src/jni/h5oImp.h
@@ -13,8 +13,8 @@
 #include <jni.h>
 /* Header for class hdf_hdf5lib_H5_H5_H5O */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5O
-#define _Included_hdf_hdf5lib_H5_H5O
+#ifndef Included_hdf_hdf5lib_H5_H5O
+#define Included_hdf_hdf5lib_H5_H5O
 
 #ifdef __cplusplus
 extern "C" {
@@ -217,4 +217,4 @@ JNIEXPORT jboolean JNICALL Java_hdf_hdf5lib_H5_H5Oare_1mdc_1flushes_1disabled(JN
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5O */
+#endif /* Included_hdf_hdf5lib_H5_H5O */
diff --git a/java/src/jni/h5pACPLImp.h b/java/src/jni/h5pACPLImp.h
@@ -10,8 +10,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5PACPL
-#define _Included_hdf_hdf5lib_H5_H5PACPL
+#ifndef Included_hdf_hdf5lib_H5_H5PACPL
+#define Included_hdf_hdf5lib_H5_H5PACPL
 
 #include <jni.h>
 
@@ -23,4 +23,4 @@ extern "C" {
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5PACPL */
+#endif /* Included_hdf_hdf5lib_H5_H5PACPL */
diff --git a/java/src/jni/h5pDAPLImp.h b/java/src/jni/h5pDAPLImp.h
@@ -10,8 +10,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5PDAPL
-#define _Included_hdf_hdf5lib_H5_H5PDAPL
+#ifndef Included_hdf_hdf5lib_H5_H5PDAPL
+#define Included_hdf_hdf5lib_H5_H5PDAPL
 
 #include <jni.h>
 
@@ -93,4 +93,4 @@ JNIEXPORT jlong JNICALL Java_hdf_hdf5lib_H5_H5Pget_1virtual_1printf_1gap(JNIEnv
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5PDAPL */
+#endif /* Included_hdf_hdf5lib_H5_H5PDAPL */
diff --git a/java/src/jni/h5pDCPLImp.h b/java/src/jni/h5pDCPLImp.h
@@ -10,8 +10,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5PDCPL
-#define _Included_hdf_hdf5lib_H5_H5PDCPL
+#ifndef Included_hdf_hdf5lib_H5_H5PDCPL
+#define Included_hdf_hdf5lib_H5_H5PDCPL
 
 #include <jni.h>
 
@@ -320,4 +320,4 @@ JNIEXPORT jstring JNICALL Java_hdf_hdf5lib_H5_H5Pget_1virtual_1prefix(JNIEnv *,
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5PDCPL */
+#endif /* Included_hdf_hdf5lib_H5_H5PDCPL */
diff --git a/java/src/jni/h5pDXPLImp.h b/java/src/jni/h5pDXPLImp.h
@@ -10,8 +10,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5PDXPL
-#define _Included_hdf_hdf5lib_H5_H5PDXPL
+#ifndef Included_hdf_hdf5lib_H5_H5PDXPL
+#define Included_hdf_hdf5lib_H5_H5PDXPL
 
 #include <jni.h>
 
@@ -181,4 +181,4 @@ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Pget_1btree_1ratios(JNIEnv *, jclas
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5PDXPL */
+#endif /* Included_hdf_hdf5lib_H5_H5PDXPL */
diff --git a/java/src/jni/h5pFAPLImp.h b/java/src/jni/h5pFAPLImp.h
@@ -10,8 +10,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5PFAPL
-#define _Included_hdf_hdf5lib_H5_H5PFAPL
+#ifndef Included_hdf_hdf5lib_H5_H5PFAPL
+#define Included_hdf_hdf5lib_H5_H5PFAPL
 
 #include <jni.h>
 
@@ -476,4 +476,4 @@ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Pget_1libver_1bounds(JNIEnv *, jcla
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5PFAPL */
+#endif /* Included_hdf_hdf5lib_H5_H5PFAPL */
diff --git a/java/src/jni/h5pFCPLImp.h b/java/src/jni/h5pFCPLImp.h
@@ -10,8 +10,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-#ifndef _Included_hdf_hdf5lib_H5_H5PFCPL
-#define _Included_hdf_hdf5lib_H5_H5PFCPL
+#ifndef Included_hdf_hdf5lib_H5_H5PFCPL
+#define Included_hdf_hdf5lib_H5_H5PFCPL
 
 #include <jni.h>
 
@@ -170,4 +170,4 @@ JNIEXPORT jint JNICALL Java_hdf_hdf5lib_H5_H5Pget_1shared_1mesg_1phase_1change(J
 } /* end extern "C" */
 #endif /* __cplusplus */
 
-#endif /* _Included_hdf_hdf5lib_H5_H5PFCPL */
+#endif /* Included_hdf_hdf5lib_H5_H5PFCPL */