Skip to content

Machine learning algorithm that identifies how many cells appear in a given microscopy image with a corresponding segmentation mask

Notifications You must be signed in to change notification settings

Hadley-Dixon/MicroscopyImages

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

34 Commits
 
 
 
 
 
 
 
 

Repository files navigation

U-Net CNN Microscopy Images

Designed, trained, and tested a U-Net convolutional neural network using PyTorch. My algorithm segments microcopy cell images to predict the location of a cell's nucleus. During training, each input image has a corresponding mask which labels a each pixel with a binary encoding as either a nucleus pixel or not. During testing, this mask was predicted on new data.

For a full description of my design architecture and results, please refer to my final report (U-Net Report.pdf).

The original 2015 paper which introduced the U-Net architecture can be found linked within my project report (U-Net Report.pdf).

About

Machine learning algorithm that identifies how many cells appear in a given microscopy image with a corresponding segmentation mask

Topics

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages