Release v1.6

Version 1.6

The target for version 1.6 is to introduce features that facilitate the application to more practical data.
Also, v 1.6 will be the fixed version of ExoJAX2 prior to the paper II submission. a pre-release of ExoJAX2 ( v2.0).

• practical use of a cloud model. See documents/tutorials/jupiters @HajimeKawahara @YuiKasagi @takayukkotani
• comprehensive review @ykawashima
• eq methods (and neq ) in opa and mdb to enable to use == (and !=) operators. #509
• compatible to radis 0.15.2, in particular, "vaex as an option" strategy #500 #506
• as a result, ExoJAX supports python 3.9 3.10, 3.11, 3.12,
• new art, ArtAbsPure, computes a pure absorption spectrum w/ and w/o a single reflection at Psurf.

Comparison

• Comparison with a tabulated cross section #491
• with pRT #427 @ykawashima

Bug Fixes

• side effect on a multiple call of opa #510
• Stark broadening #489 @chonma0ctopus
• solar abundance definition (utils.zsol.nsol) #535

Changes

removed

• recexomol #501
• lpf.auto_crosssection #498
• utils.recexomol #501
• Sij0 attribute from api.py (MdbExomol, MdbHitemp, MdbHitran) #515
• atm.mixratio.vmr2mmr, atm.mixratio.mmr2vmr (use atm.atmconvert.vmr_to_mmr, atm.atmconvert.mmr_to_vmr instead)
• spec.dit.dtauM_vald_old

all methods in dynamics package

• getE.getE, rvfunc.rvcoref, rvfunc.rvf,rvfunc.rvf2, rvfunc.rv_semi_amplitude, rvfunc.rvf1,

several methods in spec.rtransfer (deprecated since v1.5)

• dtauM,dtauCIA, dtauHminus, dtauVALD, pressure_layer

renamed

• line_strength_ref_original was introduced for line strength at T=Tref_original, instead of line_strength_ref #515
• self.line_strength_ref (which depends on self.Tref) -> self.line_strength(Tref) #515
• instances_from_dataframe -> attributes_from_dataframe

changes arguments

• qr_interp(T) -> qr_interp(T,Tref) in MdbExomol #515
• qr_interp(iso,T) -> qr_interp(iso,T,Tref) in MdbHitemp/Hitran #515
• qr_interp_line(T) -> qr_interp_line(T,Tref) in MdbHitemp/Hitran #515

new methods

• computes X, Y, Z, utils.zsol.mass_fraction_XYZ(number_ratio_elements) #535

Science Grade ExoJAX Examples (external)

• exojaxample_WASP39b HMC-NUTS analysis of JWST WASP37b (ERS) transmission spectrum by @sh-tada
• exojaxample_jupiter HMC-NUTS analysis of Jupiter reflection spectrum as taken by petitIRD