audit fix #1099
Workflow file for this run
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| name: Python Wasm | |
| on: [push,pull_request] | |
| env: | |
| pyodide-version: 0.23.1 | |
| jobs: | |
| test-itkwasm: | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| python-version: ${{ format('{0}.{1}', matrix.python-major-version, matrix.python-minor-version) }} | |
| strategy: | |
| max-parallel: 3 | |
| matrix: | |
| os: [ubuntu-22.04, windows-2022, macos-12] | |
| python-major-version: [3] | |
| python-minor-version: [7, 8, 9, 10, 11] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ env.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ env.python-version }} | |
| - name: Install dependencies | |
| working-directory: ./packages/core/python/itkwasm | |
| shell: bash | |
| run: | | |
| python -m pip install --upgrade pip | |
| cd test/test-accelerator | |
| python -m pip install -e "." | |
| cd - | |
| python -m pip install -e "." | |
| python -m pip install hatch itk pytest | |
| - name: Test on native | |
| if: ${{ matrix.python-minor-version < 10 }} | |
| working-directory: ./packages/core/python/itkwasm | |
| run: | | |
| hatch build -t wheel | |
| pytest --junitxml=junit/test-results-${{ env.python-version }}.xml | |
| - name: Download Pyodide | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| shell: bash | |
| working-directory: ./packages/core/python/itkwasm | |
| run: | | |
| curl -L https://github.com/pyodide/pyodide/releases/download/${{ env.pyodide-version }}/pyodide-${{ env.pyodide-version }}.tar.bz2 -o pyodide.tar.bz2 | |
| tar xjf pyodide.tar.bz2 | |
| rm -rf dist | |
| mv pyodide dist | |
| - name: Install pytest-pyodide | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| shell: bash | |
| run: | | |
| python -m pip install pytest-pyodide | |
| - uses: thewtex/pyodide-actions/install-browser@chrome-install | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| with: | |
| runner: selenium | |
| browser: chrome | |
| browser-version: latest | |
| - name: Test with chrome | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| working-directory: ./packages/core/python/itkwasm | |
| run: | | |
| hatch build -t wheel | |
| ls dist | |
| pytest --junitxml=junit/test-results-${{ env.python-version }}.xml --dist-dir=./dist --rt=chrome | |
| - name: Upload pytest test results | |
| uses: actions/upload-artifact@v3 | |
| if: ${{ always() }} | |
| with: | |
| name: pytest-results-${{ env.python-version }} | |
| path: 'packages/core/python/itkwasm/junit/test-results*.xml' | |
| test-pythonpackages: | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| python-version: ${{ format('{0}.{1}', matrix.python-major-version, matrix.python-minor-version) }} | |
| strategy: | |
| max-parallel: 3 | |
| matrix: | |
| os: [ubuntu-22.04, windows-2022, macos-12] | |
| python-major-version: [3] | |
| python-minor-version: [7, 8, 9, 10, 11] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ env.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ env.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install hatch pytest | |
| - name: Install pytest-pyodide | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| shell: bash | |
| run: | | |
| python -m pip install pytest-pyodide | |
| - uses: thewtex/pyodide-actions/install-browser@chrome-install | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| with: | |
| runner: selenium | |
| browser: chrome | |
| browser-version: latest | |
| - name: Test compress-stringify wasi native | |
| if: ${{ matrix.python-minor-version < 10 }} | |
| working-directory: ./packages/compress-stringify/python/itkwasm-compress-stringify-wasi | |
| run: | | |
| python -m pip install -e . | |
| pytest | |
| - name: Test compress-stringify-emscripten chrome | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| working-directory: ./packages/compress-stringify/python/itkwasm-compress-stringify-emscripten | |
| shell: bash | |
| run: | | |
| hatch run download-pyodide | |
| hatch build -t wheel | |
| ls dist | |
| python -m pip install -e . | |
| pytest --dist-dir=./dist --rt=chrome | |
| - name: Test compress-stringify chrome | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| working-directory: ./packages/compress-stringify/python/itkwasm-compress-stringify | |
| shell: bash | |
| run: | | |
| hatch run download-pyodide | |
| hatch build -t wheel | |
| ls dist | |
| python -m pip install -e . | |
| pytest --dist-dir=./dist --rt=chrome | |
| - uses: actions/setup-node@v3 | |
| with: | |
| node-version: '18.16' | |
| - name: Download test data | |
| shell: bash | |
| run: | | |
| npm ci | |
| npm run build:testData | |
| - name: Test dicom wasi native | |
| if: ${{ matrix.python-minor-version < 10 }} | |
| working-directory: ./packages/dicom/python/itkwasm-dicom-wasi | |
| run: | | |
| python -m pip install pillow | |
| python -m pip install -e . | |
| pytest | |
| - name: Test dicom-emscripten chrome | |
| if: ${{ matrix.python-minor-version > 9 }} | |
| working-directory: ./packages/dicom/python/itkwasm-dicom-emscripten | |
| shell: bash | |
| run: | | |
| hatch run download-pyodide | |
| hatch build -t wheel | |
| ls dist | |
| python -m pip install -e . | |
| pytest --dist-dir=./dist --rt=chrome |