fix(dicom): Python Json types corrections, wasi dicom series handling

packages/dicom/python/itkwasm-dicom-emscripten/itkwasm_dicom_emscripten/apply_presentation_state_to_image_async.py

@@ -1,8 +1,6 @@
-# Generated file. Do not edit.
-
 from pathlib import Path
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from .js_package import js_package
 

packages/dicom/python/itkwasm-dicom-emscripten/itkwasm_dicom_emscripten/read_dicom_encapsulated_pdf_async.py

@@ -2,7 +2,7 @@
 
 from pathlib import Path
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from .js_package import js_package
 

packages/dicom/python/itkwasm-dicom-emscripten/itkwasm_dicom_emscripten/read_image_dicom_file_series_async.py

@@ -1,5 +1,3 @@
-# Generated file. Do not edit.
-
 from pathlib import Path
 import os
 from typing import Dict, Tuple, Optional, List
@@ -20,7 +18,7 @@
 async def read_image_dicom_file_series_async(
     input_images: List[os.PathLike] = [],
     single_sorted_series: bool = False,
-) -> Tuple[Image, Dict]:
+) -> Tuple[Image, List[str]]:
     """Read a DICOM image series and return the associated image volume
 
     :param input_images: File names in the series
@@ -33,7 +31,7 @@ async def read_image_dicom_file_series_async(
     :rtype:  Image
 
     :return: Output sorted filenames
-    :rtype:  Dict
+    :rtype:  List[str]
     """
     js_module = await js_package.js_module
     web_worker = js_resources.web_worker

packages/dicom/python/itkwasm-dicom-emscripten/itkwasm_dicom_emscripten/structured_report_to_html_async.py

@@ -2,7 +2,7 @@
 
 from pathlib import Path
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from .js_package import js_package
 

packages/dicom/python/itkwasm-dicom-emscripten/itkwasm_dicom_emscripten/structured_report_to_text_async.py

@@ -2,7 +2,7 @@
 
 from pathlib import Path
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from .js_package import js_package
 

packages/dicom/python/itkwasm-dicom-wasi/itkwasm_dicom_wasi/apply_presentation_state_to_image.py

@@ -1,5 +1,3 @@
-# Generated file. Do not edit.
-
 from pathlib import Path, PurePosixPath
 import os
 from typing import Dict, Tuple, Optional, List

packages/dicom/python/itkwasm-dicom-wasi/itkwasm_dicom_wasi/read_dicom_encapsulated_pdf.py

@@ -2,7 +2,7 @@
 
 from pathlib import Path, PurePosixPath
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from importlib_resources import files as file_resources
 

packages/dicom/python/itkwasm-dicom-wasi/itkwasm_dicom_wasi/read_image_dicom_file_series.py

@@ -1,5 +1,3 @@
-# Generated file. Do not edit.
-
 from pathlib import Path, PurePosixPath
 import os
 from typing import Dict, Tuple, Optional, List
@@ -20,7 +18,7 @@
 def read_image_dicom_file_series(
     input_images: List[os.PathLike] = [],
     single_sorted_series: bool = False,
-) -> Tuple[Image, Dict]:
+) -> Tuple[Image, List[str]]:
     """Read a DICOM image series and return the associated image volume
 
     :param input_images: File names in the series
@@ -33,7 +31,7 @@ def read_image_dicom_file_series(
     :rtype:  Image
 
     :return: Output sorted filenames
-    :rtype:  Dict
+    :rtype:  List[str]
     """
     global _pipeline
     if _pipeline is None:
@@ -53,10 +51,9 @@ def read_image_dicom_file_series(
     args.append('0')
     args.append('1')
     # Options
-    if len(input_images) > 1:
-        if len(input_images) < 1:
-            raise ValueError('"input-images" option must have a length > 1')
-
+    if len(input_images) < 1:
+       raise ValueError('"input-images" kwarg must have a length > 1')
+    if len(input_images) > 0:
         args.append('--input-images')
         for value in input_images:
             input_file = str(PurePosixPath(input_images))

packages/dicom/python/itkwasm-dicom-wasi/itkwasm_dicom_wasi/structured_report_to_html.py

@@ -2,7 +2,7 @@
 
 from pathlib import Path, PurePosixPath
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from importlib_resources import files as file_resources
 

packages/dicom/python/itkwasm-dicom-wasi/itkwasm_dicom_wasi/structured_report_to_text.py

@@ -2,7 +2,7 @@
 
 from pathlib import Path, PurePosixPath
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from importlib_resources import files as file_resources
 

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/apply_presentation_state_to_image.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,
@@ -17,7 +17,7 @@ def apply_presentation_state_to_image(
     frame: int = 1,
     no_presentation_state_output: bool = False,
     no_bitmap_output: bool = False,
-) -> Tuple[Dict, Image]:
+) -> Tuple[Any, Image]:
     """Apply a presentation state to a given DICOM image and render output as bitmap, or dicom file.
 
     :param image_in: Input DICOM file
@@ -42,7 +42,7 @@ def apply_presentation_state_to_image(
     :type  no_bitmap_output: bool
 
     :return: Output overlay information
-    :rtype:  Dict
+    :rtype:  Any
 
     :return: Output image
     :rtype:  Image

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/apply_presentation_state_to_image_async.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,
@@ -17,7 +17,7 @@ async def apply_presentation_state_to_image_async(
     frame: int = 1,
     no_presentation_state_output: bool = False,
     no_bitmap_output: bool = False,
-) -> Tuple[Dict, Image]:
+) -> Tuple[Any, Image]:
     """Apply a presentation state to a given DICOM image and render output as bitmap, or dicom file.
 
     :param image_in: Input DICOM file
@@ -42,7 +42,7 @@ async def apply_presentation_state_to_image_async(
     :type  no_bitmap_output: bool
 
     :return: Output overlay information
-    :rtype:  Dict
+    :rtype:  Any
 
     :return: Output image
     :rtype:  Image

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/read_dicom_encapsulated_pdf.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/read_dicom_encapsulated_pdf_async.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/read_image_dicom_file_series.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,
@@ -12,7 +12,7 @@
 def read_image_dicom_file_series(
     input_images: List[os.PathLike] = [],
     single_sorted_series: bool = False,
-) -> Tuple[Image, Dict]:
+) -> Tuple[Image, Any]:
     """Read a DICOM image series and return the associated image volume
 
     :param input_images: File names in the series
@@ -25,7 +25,7 @@ def read_image_dicom_file_series(
     :rtype:  Image
 
     :return: Output sorted filenames
-    :rtype:  Dict
+    :rtype:  Any
     """
     func = environment_dispatch("itkwasm_dicom", "read_image_dicom_file_series")
     output = func(input_images=input_images, single_sorted_series=single_sorted_series)

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/read_image_dicom_file_series_async.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,
@@ -12,7 +12,7 @@
 async def read_image_dicom_file_series_async(
     input_images: List[os.PathLike] = [],
     single_sorted_series: bool = False,
-) -> Tuple[Image, Dict]:
+) -> Tuple[Image, Any]:
     """Read a DICOM image series and return the associated image volume
 
     :param input_images: File names in the series
@@ -25,7 +25,7 @@ async def read_image_dicom_file_series_async(
     :rtype:  Image
 
     :return: Output sorted filenames
-    :rtype:  Dict
+    :rtype:  Any
     """
     func = environment_dispatch("itkwasm_dicom", "read_image_dicom_file_series_async")
     output = await func(input_images=input_images, single_sorted_series=single_sorted_series)

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/structured_report_to_html.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/structured_report_to_html_async.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/structured_report_to_text.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,

packages/dicom/python/itkwasm-dicom/itkwasm_dicom/structured_report_to_text_async.py

@@ -1,7 +1,7 @@
 # Generated file. Do not edit.
 
 import os
-from typing import Dict, Tuple, Optional, List
+from typing import Dict, Tuple, Optional, List, Any
 
 from itkwasm import (
     environment_dispatch,