Hotfix: Always create a PR for updating journal lists #12449
Workflow file for this run
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| name: Deployment | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| notarization: | |
| type: boolean | |
| required: false | |
| default: false | |
| push: | |
| branches: | |
| - main | |
| - main-release | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'src/test/**' | |
| - 'README.md' | |
| tags: | |
| - '*' | |
| pull_request: | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'src/test/**' | |
| - 'README.md' | |
| env: | |
| SpringerNatureAPIKey: ${{ secrets.SpringerNatureAPIKey }} | |
| AstrophysicsDataSystemAPIKey: ${{ secrets.AstrophysicsDataSystemAPIKey }} | |
| IEEEAPIKey: ${{ secrets.IEEEAPIKey }} | |
| BiodiversityHeritageApiKey: ${{ secrets.BiodiversityHeritageApiKey}} | |
| OSXCERT: ${{ secrets.OSX_SIGNING_CERT }} | |
| GRADLE_OPTS: -Xmx4g -Dorg.gradle.daemon=false -Dorg.gradle.vfs.watch=false | |
| JAVA_OPTS: -Xmx4g | |
| JDK21: "" | |
| concurrency: | |
| group: ${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| include: | |
| - os: ubuntu-latest | |
| displayName: linux | |
| archivePortable: tar -c -C build/distribution JabRef | pigz --rsyncable > build/distribution/JabRef-portable_linux.tar.gz && rm -R build/distribution/JabRef | |
| eaJdk: https://files.jabref.org/jdks/jdk-linux-x64.tar.gz | |
| - os: windows-latest | |
| displayName: windows | |
| archivePortable: 7z a -r build/distribution/JabRef-portable_windows.zip ./build/distribution/JabRef && rm -R build/distribution/JabRef | |
| eaJDK: https://files.jabref.org/jdks/jdk-windows-x64.zip | |
| - os: macos-latest | |
| displayName: macOS | |
| archivePortable: brew install pigz && tar -c -C build/distribution JabRef.app | pigz --rsyncable > build/distribution/JabRef-portable_macos.tar.gz && rm -R build/distribution/JabRef.app | |
| eaJDK: https://files.jabref.org/jdks/jdk-macos-x64.tar.gz | |
| runs-on: ${{ matrix.os }} | |
| name: Create installer and portable version for ${{ matrix.displayName }} | |
| steps: | |
| - name: Check secrets presence | |
| id: checksecrets | |
| shell: bash | |
| run: | | |
| if [ "$BUILDJABREFPRIVATEKEY" == "" ]; then | |
| echo "secretspresent=NO" >> $GITHUB_OUTPUT | |
| else | |
| echo "secretspresent=YES" >> $GITHUB_OUTPUT | |
| fi | |
| env: | |
| BUILDJABREFPRIVATEKEY: ${{ secrets.buildJabRefPrivateKey }} | |
| - name: Fetch all history for all tags and branches | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Install GitVersion | |
| uses: gittools/actions/gitversion/setup@v0.10.2 | |
| with: | |
| versionSpec: "5.x" | |
| - name: Run GitVersion | |
| id: gitversion | |
| uses: gittools/actions/gitversion/execute@v0.10.2 | |
| - name: Set up JDK | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: 20 | |
| distribution: 'temurin' | |
| cache: 'gradle' | |
| - name: setup jdk JabRef-fix (windows) | |
| if: (matrix.os == 'windows-latest') | |
| shell: bash | |
| run: | | |
| mkdir ${{runner.temp}}\jdk | |
| curl -kLsS ${{matrix.eaJDK}} -o temp.zip && 7z x temp.zip -o"$(cygpath -u "$RUNNER_TEMP\jdk")" | |
| echo "JDK21=${{runner.temp}}\jdk\jdk-21" >> "$GITHUB_ENV" | |
| ls "$(cygpath -u "$RUNNER_TEMP\jdk\jdk-21")" | |
| echo "org.gradle.java.installations.paths=${{runner.temp}}\jdk\jdk-21" | sed "s/\\\\/\\\\\\\\/g" >> gradle.properties | |
| echo "org.gradle.java.installations.auto-detect=false" >> gradle.properties | |
| cat gradle.properties | |
| sed -i "s/JavaLanguageVersion.of(20)/JavaLanguageVersion.of(21)/" build.gradle | |
| - name: setup jdk JabRef-fix (ubuntu) | |
| if: (matrix.os == 'ubuntu-latest') | |
| shell: bash | |
| run: | | |
| mkdir ${{runner.temp}}/jdk | |
| wget -qO- ${{matrix.eaJDK}} | tar xz -C ${{runner.temp}}/jdk | |
| echo "JDK21=${{runner.temp}}/jdk/jdk-21" >> "$GITHUB_ENV" | |
| ls ${{runner.temp}}/jdk | |
| echo "org.gradle.java.installations.paths=${{runner.temp}}/jdk/jdk-21" >> gradle.properties | |
| echo "org.gradle.java.installations.auto-detect=false" >> gradle.properties | |
| cat gradle.properties | |
| sed -i "s/JavaLanguageVersion.of(20)/JavaLanguageVersion.of(21)/" build.gradle | |
| - name: setup jdk JabRef-fix (macos) | |
| if: (matrix.os == 'macos-latest') | |
| shell: bash | |
| run: | | |
| mkdir ${{runner.temp}}/jdk | |
| wget -qO- ${{matrix.eaJDK}} | tar xz -C ${{runner.temp}}/jdk | |
| mv ${{runner.temp}}/jdk/jdk-21.jdk ${{runner.temp}}/jdk/jdk-21 | |
| echo "JDK21=${{runner.temp}}/jdk/jdk-21" >> "$GITHUB_ENV" | |
| ls ${{runner.temp}}/jdk | |
| echo "org.gradle.java.installations.paths=${{runner.temp}}/jdk/jdk-21" >> gradle.properties | |
| echo "org.gradle.java.installations.auto-detect=false" >> gradle.properties | |
| cat gradle.properties | |
| sed -i'.bak' -e "s/JavaLanguageVersion.of(20)/JavaLanguageVersion.of(21)/" build.gradle | |
| - name: Setup OSX key chain (macos) | |
| if: (matrix.os == 'macos-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: apple-actions/import-codesign-certs@v2 | |
| with: | |
| p12-file-base64: ${{ secrets.OSX_SIGNING_CERT }} | |
| p12-password: ${{ secrets.OSX_CERT_PWD }} | |
| keychain-password: jabref | |
| - name: Setup OSX key chain on OSX for app id cert (macos) | |
| if: (matrix.os == 'macos-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: apple-actions/import-codesign-certs@v2 | |
| with: | |
| p12-file-base64: ${{ secrets.OSX_SIGNING_CERT_APPLICATION }} | |
| p12-password: ${{ secrets.OSX_CERT_PWD }} | |
| create-keychain: false | |
| keychain-password: jabref | |
| - name: Build runtime image (non-macos) | |
| if: (matrix.os != 'macos-latest') | |
| run: ./gradlew -i -PprojVersion="${{ steps.gitversion.outputs.AssemblySemVer }}" -PprojVersionInfo="${{ steps.gitversion.outputs.InformationalVersion }}" jlinkZip | |
| - name: Prepare merged jars and modules dir (macos) | |
| if: (matrix.os == 'macos-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| run: ./gradlew -i -PprojVersion="${{ steps.gitversion.outputs.AssemblySemVer }}" -PprojVersionInfo="${{ steps.gitversion.outputs.InformationalVersion }}" prepareModulesDir | |
| - name: Build installer (non-macos) | |
| if: (matrix.os != 'macos-latest') | |
| shell: bash | |
| run: ./gradlew -i -PprojVersion="${{ steps.gitversion.outputs.AssemblySemVer }}" -PprojVersionInfo="${{ steps.gitversion.outputs.InformationalVersion }}" jpackage | |
| - name: Build dmg (macos) | |
| if: (matrix.os == 'macos-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| ${{env.JDK21}}/Contents/Home/bin/jpackage \ | |
| --module org.jabref/org.jabref.cli.Launcher \ | |
| --module-path ${{env.JDK21}}/Contents/Home/jmods/:build/jlinkbase/jlinkjars \ | |
| --add-modules org.jabref,org.jabref.merged.module \ | |
| --dest build/distribution \ | |
| --name JabRef \ | |
| --app-version ${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }} \ | |
| --verbose \ | |
| --mac-sign \ | |
| --vendor JabRef \ | |
| --mac-package-identifier Jabref \ | |
| --mac-package-name JabRef \ | |
| --type dmg --mac-signing-key-user-name "JabRef e.V. (6792V39SK3)" \ | |
| --mac-package-signing-prefix org.jabref \ | |
| --mac-entitlements buildres/mac/jabref.entitlements \ | |
| --icon src/main/resources/icons/jabref.icns \ | |
| --resource-dir buildres/mac \ | |
| --file-associations buildres/mac/bibtexAssociations.properties \ | |
| --jlink-options --bind-services | |
| - name: Build pkg (macos) | |
| if: (matrix.os == 'macos-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: | | |
| ${{env.JDK21}}/Contents/Home/bin/jpackage \ | |
| --module org.jabref/org.jabref.cli.Launcher \ | |
| --module-path ${{env.JDK21}}/Contents/Home/jmods/:build/jlinkbase/jlinkjars \ | |
| --add-modules org.jabref,org.jabref.merged.module \ | |
| --dest build/distribution \ | |
| --name JabRef \ | |
| --app-version ${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }} \ | |
| --verbose \ | |
| --mac-sign \ | |
| --vendor JabRef \ | |
| --mac-package-identifier Jabref \ | |
| --mac-package-name JabRef \ | |
| --type pkg --mac-signing-key-user-name "JabRef e.V. (6792V39SK3)" \ | |
| --mac-package-signing-prefix org.jabref \ | |
| --mac-entitlements buildres/mac/jabref.entitlements \ | |
| --icon src/main/resources/icons/jabref.icns \ | |
| --resource-dir buildres/mac \ | |
| --file-associations buildres/mac/bibtexAssociations.properties \ | |
| --jlink-options --bind-services | |
| - name: Package application image (non-macos) | |
| if: (matrix.os != 'macos-latest') | |
| shell: bash | |
| run: ${{ matrix.archivePortable }} | |
| - name: Rename files | |
| if: (matrix.os != 'macos-latest') || (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: pwsh | |
| run: | | |
| get-childitem -Path build/distribution/* | rename-item -NewName {$_.name -replace "${{ steps.gitversion.outputs.AssemblySemVer }}","${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}"} | |
| get-childitem -Path build/distribution/* | rename-item -NewName {$_.name -replace "portable","${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}-portable"} | |
| - name: Repack deb file for Debian (compression) | |
| if: (matrix.os == 'ubuntu-latest') | |
| shell: bash | |
| run: | | |
| cd build/distribution | |
| ar x jabref_${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}_amd64.deb | |
| zstd -d < control.tar.zst | xz > control.tar.xz | |
| zstd -d < data.tar.zst | xz > data.tar.xz | |
| ar -m -c -a sdsd jabref_${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}_amd64_repackaged.deb debian-binary control.tar.xz data.tar.xz | |
| rm debian-binary control.tar.* data.tar.* | |
| mv -f jabref_${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}_amd64_repackaged.deb jabref_${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}_amd64.deb | |
| - name: Upload to builds.jabref.org (ubuntu) | |
| if: (matrix.os == 'ubuntu-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: Pendect/action-rsyncer@v2.0.0 | |
| env: | |
| DEPLOY_KEY: ${{ secrets.buildJabRefPrivateKey }} | |
| with: | |
| flags: -vaz --itemize-changes --stats --partial-dir=/tmp/partial --rsync-path="mkdir -p /var/www/builds.jabref.org/www/${{ steps.gitversion.outputs.branchName }} && rsync" | |
| options: '' | |
| ssh_options: '-p 9922' | |
| src: 'build/distribution/' | |
| dest: jrrsync@build-upload.jabref.org:/var/www/builds.jabref.org/www/${{ steps.gitversion.outputs.branchName }}/ | |
| - name: Upload to GitHub workflow artifacts store (windows) | |
| if: (matrix.os == 'windows-latest') | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: JabRef-${{ matrix.displayName }} | |
| path: build/distribution | |
| - name: Upload to GitHub workflow artifacts store (macos) | |
| if: (matrix.os == 'macos-latest') && (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| # tbn = to-be-notarized | |
| name: JabRef-macOS-tbn | |
| path: build/distribution | |
| notarize: # outsourced in a separate job to be able to rerun if this fails for timeouts | |
| name: Notarize and package Mac OS binaries | |
| runs-on: macos-latest | |
| needs: [build] | |
| steps: | |
| - name: Check secrets presence | |
| id: checksecrets | |
| shell: bash | |
| run: | | |
| if [ "$BUILDJABREFPRIVATEKEY" == "" ]; then | |
| echo "secretspresent=NO" >> $GITHUB_OUTPUT | |
| else | |
| echo "secretspresent=YES" >> $GITHUB_OUTPUT | |
| fi | |
| env: | |
| BUILDJABREFPRIVATEKEY: ${{ secrets.buildJabRefPrivateKey }} | |
| - name: Fetch all history for all tags and branches | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Install GitVersion | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: gittools/actions/gitversion/setup@v0.10.2 | |
| with: | |
| versionSpec: "5.x" | |
| - name: Run GitVersion | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| id: gitversion | |
| uses: gittools/actions/gitversion/execute@v0.10.2 | |
| - name: Get macOS binaries | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: actions/download-artifact@master | |
| with: | |
| name: JabRef-macOS-tbn | |
| path: build/distribution/ | |
| - name: Notarize dmg | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') && (startsWith(github.ref, 'refs/tags/') || inputs.notarization == true) | |
| shell: bash | |
| run: | | |
| xcrun notarytool store-credentials "notarytool-profile" --apple-id "vorstand@jabref.org" --team-id "6792V39SK3" --password "${{ secrets.OSX_NOTARIZATION_APP_PWD }}" | |
| xcrun notarytool submit build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}.dmg --keychain-profile "notarytool-profile" --wait | |
| xcrun stapler staple build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}.dmg | |
| - name: Notarize pkg | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') && (startsWith(github.ref, 'refs/tags/') || inputs.notarization == true) | |
| shell: bash | |
| run: | | |
| xcrun notarytool store-credentials "notarytool-profile" --apple-id "vorstand@jabref.org" --team-id "6792V39SK3" --password "${{ secrets.OSX_NOTARIZATION_APP_PWD }}" | |
| xcrun notarytool submit build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}.pkg --keychain-profile "notarytool-profile" --wait | |
| xcrun stapler staple build/distribution/JabRef-${{ steps.gitversion.outputs.Major }}.${{ steps.gitversion.outputs.Minor }}.pkg | |
| - name: Package application image | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| shell: bash | |
| run: ${{ matrix.archivePortable }} | |
| - name: Upload to GitHub workflow artifacts store | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: JabRef-macOS | |
| path: build/distribution | |
| upload: | |
| strategy: | |
| fail-fast: false | |
| name: Upload binaries on builds.jabref.org | |
| runs-on: ubuntu-latest | |
| needs: [build, notarize] | |
| steps: | |
| - name: Check secrets presence | |
| id: checksecrets | |
| shell: bash | |
| run: | | |
| if [ "$BUILDJABREFPRIVATEKEY" == "" ]; then | |
| echo "secretspresent=NO" >> $GITHUB_OUTPUT | |
| else | |
| echo "secretspresent=YES" >> $GITHUB_OUTPUT | |
| fi | |
| env: | |
| BUILDJABREFPRIVATEKEY: ${{ secrets.buildJabRefPrivateKey }} | |
| - name: Checkout source | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: actions/checkout@v3 | |
| - name: Fetch all history for all tags and branches | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| run: git fetch --prune --unshallow | |
| - name: Install GitVersion | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: gittools/actions/gitversion/setup@v0.10.2 | |
| with: | |
| versionSpec: '5.x' | |
| - name: Run GitVersion | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| id: gitversion | |
| uses: gittools/actions/gitversion/execute@v0.10.2 | |
| - name: Get windows binaries | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: actions/download-artifact@master | |
| with: | |
| name: JabRef-windows | |
| path: build/distribution | |
| - name: Get macOS binaries unsigned | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') && (inputs.notarization == false && ! startsWith(github.ref, 'refs/tags/')) | |
| uses: actions/download-artifact@master | |
| with: | |
| name: JabRef-macOS-tbn | |
| path: build/distribution/ | |
| - name: Get macOS binaries notarized | |
| if: (steps.checksecrets.outputs.secretspresent == 'YES') && (inputs.notarization == true || startsWith(github.ref, 'refs/tags/')) | |
| uses: actions/download-artifact@master | |
| with: | |
| name: JabRef-macOS | |
| path: build/distribution/ | |
| # Upload to build server using rsync | |
| # The action runs on linux only (because it is a Dockerized action), therefore it is embedded in a separate workflow | |
| - name: Upload to builds.jabref.org | |
| if: steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: Pendect/action-rsyncer@v2.0.0 | |
| env: | |
| DEPLOY_KEY: ${{ secrets.buildJabRefPrivateKey }} | |
| with: | |
| flags: -vaz --itemize-changes --stats --partial-dir=/tmp/partial --rsync-path="mkdir -p /var/www/builds.jabref.org/www/${{ steps.gitversion.outputs.branchName }} && rsync" | |
| options: '' | |
| ssh_options: '-p 9922' | |
| src: 'build/distribution/' | |
| dest: jrrsync@build-upload.jabref.org:/var/www/builds.jabref.org/www/${{ steps.gitversion.outputs.branchName }}/ | |
| - name: Comment PR | |
| if: github.event_name == 'pull_request' && steps.checksecrets.outputs.secretspresent == 'YES' | |
| uses: thollander/actions-comment-pull-request@v2 | |
| with: | |
| message: | | |
| The build of this PR is available at <https://builds.jabref.org/pull/${{ github.event.pull_request.number }}/merge>. | |
| comment_tag: download-link | |
| mode: recreate |