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Update medline xsd schema to include mathml and other stuff #6350

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Update medline xsd schema to include mathml and other stuff #6350

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f009e12
create new pubmed xsd
Siedlerchr Apr 24, 2020
38d40f4
add new medline generated xsd
Siedlerchr Apr 25, 2020
3eb0ba4
Update medline with mathml support
Siedlerchr Apr 25, 2020
a48808b
Include mathml
Siedlerchr Apr 25, 2020
df8f074
enable extension mode
Siedlerchr Apr 25, 2020
f71006e
update schema from dtd
Siedlerchr Apr 27, 2020
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2 changes: 1 addition & 1 deletion buildSrc/src/main/groovy/org/jabref/build/xjc/XjcTask.groovy
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Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@ class XjcTask extends DefaultTask {
@TaskAction
def generateClasses() {
project.mkdir(outputDirectory)
project.ant.xjc(destdir: outputDirectory, package: javaPackage, encoding: getEncoding()) {
project.ant.xjc(destdir: outputDirectory, package: javaPackage, encoding: getEncoding(), extension: true) {
schema(dir: schemaFile.getParent(), includes: schemaFile.getName())
if (bindingFile != null) {
binding(dir: bindingFile.getParent(), includes: bindingFile.getName())
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261 changes: 0 additions & 261 deletions src/main/resources/xjc/medline/bookdoc_160101.xsd
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This file was deleted.

99 changes: 99 additions & 0 deletions src/main/resources/xjc/medline/mathml3-common.xsd
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Original file line number Diff line number Diff line change
@@ -0,0 +1,99 @@
<?xml version="1.0" encoding="UTF-8"?>
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema"
xmlns:m="http://www.w3.org/1998/Math/MathML"
elementFormDefault="qualified"
targetNamespace="http://www.w3.org/1998/Math/MathML">
<xs:element name="math">
<xs:complexType>
<xs:group minOccurs="0" maxOccurs="unbounded" ref="m:MathExpression"/>
<xs:attributeGroup ref="m:math.attributes"/>
</xs:complexType>
</xs:element>
<xs:attributeGroup name="CommonDeprecatedAtt">
<xs:attribute name="other"/>
</xs:attributeGroup>
<xs:attributeGroup name="CommonAtt">
<xs:attribute name="id" type="xs:ID"/>
<xs:attribute name="xref"/>
<xs:attribute name="class" type="xs:NMTOKENS"/>
<xs:attribute name="style" type="xs:string"/>
<xs:attribute name="href" type="xs:anyURI"/>
<xs:attributeGroup ref="m:CommonDeprecatedAtt"/>
<xs:anyAttribute namespace="##other" processContents="skip"/>
</xs:attributeGroup>
<xs:attributeGroup name="math.deprecatedattributes">
<xs:attribute name="mode" type="xs:string"/>
<xs:attribute name="macros" type="xs:string"/>
</xs:attributeGroup>
<xs:attributeGroup name="name">
<xs:attribute name="name" use="required" type="xs:NCName"/>
</xs:attributeGroup>
<xs:attributeGroup name="cd">
<xs:attribute name="cd" use="required" type="xs:NCName"/>
</xs:attributeGroup>
<xs:attributeGroup name="src">
<xs:attribute name="src" type="xs:anyURI"/>
</xs:attributeGroup>
<xs:element name="annotation">
<xs:complexType mixed="true">
<xs:attributeGroup ref="m:annotation.attributes"/>
</xs:complexType>
</xs:element>
<xs:complexType name="annotation-xml.model"><!--content model altered for libxml (annotation-xml)--><xs:sequence>
<xs:any processContents="lax"/>
</xs:sequence>
</xs:complexType>
<xs:group name="anyElement">
<xs:choice>
<xs:any namespace="##other" processContents="skip"/>
<xs:any namespace="##local" processContents="skip"/>
</xs:choice>
</xs:group>
<xs:element name="annotation-xml">
<xs:complexType>
<xs:complexContent>
<xs:extension base="m:annotation-xml.model">
<xs:attributeGroup ref="m:annotation.attributes"/>
</xs:extension>
</xs:complexContent>
</xs:complexType>
</xs:element>
<xs:attributeGroup name="annotation.attributes">
<xs:attributeGroup ref="m:CommonAtt"/>
<xs:attribute name="cd" type="xs:NCName"/>
<xs:attribute name="name" type="xs:NCName"/>
<xs:attributeGroup ref="m:DefEncAtt"/>
<xs:attributeGroup ref="m:src"/>
</xs:attributeGroup>
<xs:attributeGroup name="DefEncAtt">
<xs:attribute name="encoding" type="xs:string"/>
<xs:attribute name="definitionURL" type="xs:anyURI"/>
</xs:attributeGroup>
<xs:group name="semantics">
<xs:sequence>
<xs:element name="semantics">
<xs:complexType>
<xs:sequence>
<xs:group ref="m:MathExpression"/>
<xs:choice minOccurs="0" maxOccurs="unbounded">
<xs:element ref="m:annotation"/>
<xs:element ref="m:annotation-xml"/>
</xs:choice>
</xs:sequence>
<xs:attributeGroup ref="m:semantics.attributes"/>
</xs:complexType>
</xs:element>
</xs:sequence>
</xs:group>
<xs:attributeGroup name="semantics.attributes">
<xs:attributeGroup ref="m:CommonAtt"/>
<xs:attributeGroup ref="m:DefEncAtt"/>
<xs:attribute name="cd" type="xs:NCName"/>
<xs:attribute name="name" type="xs:NCName"/>
</xs:attributeGroup>
<xs:simpleType name="length">
<xs:restriction base="xs:string">
<xs:pattern value="\s*((-?[0-9]*([0-9]\.?|\.[0-9])[0-9]*(e[mx]|in|cm|mm|p[xtc]|%)?)|(negative)?((very){0,2}thi(n|ck)|medium)mathspace)\s*"/>
</xs:restriction>
</xs:simpleType>
</xs:schema>
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