Merge pull request #58 from JohanSchott/install_openmpi_with_homebrew

Install open-mpi with homebrew on macOS

install_setup.sh

@@ -6,26 +6,15 @@ cd "$( dirname "${BASH_SOURCE[0]}" )"
 # System libraries
 if [ "$(uname)" == "Darwin" ]; then
     # Mac OS X specific things here
+    # If homebrew is not installed, install it by following the
+    # instructions on https://brew.sh/
     if ! which gfortran; then
         echo Install gfortran
-        ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)"
-        brew update
-        brew doctor
         brew install gcc
-        brew install swig
     fi
     if ! which mpirun; then
         echo Install Open-MPI
-        curl -O https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.1.tar.gz
-        mv openmpi-4.1.1.tar.gz /tmp/
-        cd /tmp
-        tar -xf openmpi-4.1.1.tar.gz
-        cd openmpi-4.1.1/
-        mkdir /usr/local/openmpi
-        ./configure --prefix=/usr/local/openmpi
-        make all
-        make install
-        export PATH=${PATH}:/usr/local/openmpi/bin
+        brew install open-mpi
     fi
 elif [ "$(expr substr $(uname -s) 1 5)" == "Linux" ]; then
     # Only for Debian, Ubuntu, and related Linux distributions
@@ -43,5 +32,5 @@ python3 -m venv ~/envED
 . ~/envED/bin/activate
 
 # Install required python libraries.
-pip install --disable-pip-version-check -q -U uv==0.1.21
-uv pip install -q -r requirements.in
+pip install --disable-pip-version-check -q -U uv==0.2.15
+uv pip install -q -r requirements.in

requirements.in

@@ -1,17 +1,17 @@
 # Needed python packages
 bitarray==2.9.2
-black==24.3.0
-h5py==3.10.0
-matplotlib==3.8.3
-mpi4py==3.1.5
-numpy==1.26.4
-numpydoc==1.6.0
-pytest==8.1.1
-sympy==1.12
-scipy==1.12.0
-sphinx==7.2.6
+black==24.4.2
+h5py==3.11.0
+matplotlib==3.9.0
+mpi4py==3.1.6
+numpy==2.0.0
+numpydoc==1.7.0
+pytest==8.2.2
+sympy==1.12.1
+scipy==1.14.0
+sphinx==7.3.7
 sphinx-rtd-theme==2.0.0
-mypy==1.9.0
+mypy==1.10.1
 sphinx-autodoc-typehints==2.0.0
-ruff==0.3.3
-typeguard==4.1.5
+ruff==0.4.10
+typeguard==4.3.0