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CSV.File failing for gzipped file in Julia 1.11-rc #1137

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oscarvdvelde opened this issue Jul 18, 2024 · 1 comment · Fixed by #1144
Closed

CSV.File failing for gzipped file in Julia 1.11-rc #1137

oscarvdvelde opened this issue Jul 18, 2024 · 1 comment · Fixed by #1144

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@oscarvdvelde
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oscarvdvelde commented Jul 18, 2024

``
test3.dat.gz
`

julia> lmadata = CSV.File(raw"C:\Users\oscar\Documents\Work\Julia\test3.dat.gz")
ERROR: IOError: unlink("C:\\Users\\oscar\\AppData\\Local\\Temp\\jl_F294.tmp"): permission denied (EACCES)
Stacktrace:
 [1] uv_error
   @ .\libuv.jl:106 [inlined]
 [2] unlink(p::String)
   @ Base.Filesystem .\file.jl:1105
 [3] rm(path::String; force::Bool, recursive::Bool)
   @ Base.Filesystem .\file.jl:283
 [4] rm
   @ .\file.jl:273 [inlined]
 [5] CSV.File(ctx::CSV.Context, chunking::Bool)
   @ CSV C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:344
 [6] File
   @ C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:227 [inlined]
 [7] #File#32
   @ C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:223 [inlined]
 [8] CSV.File(source::String)
   @ CSV C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:162

julia> lmadata = CSV.File(raw"C:\Users\oscar\Documents\Work\Julia\test3.dat.gz",header=false,delim=' ', ignorerepeated=true)
ERROR: IOError: unlink("C:\\Users\\oscar\\AppData\\Local\\Temp\\jl_B18B.tmp"): permission denied (EACCES)
Stacktrace:
 [1] uv_error
   @ .\libuv.jl:106 [inlined]
 [2] unlink(p::String)
   @ Base.Filesystem .\file.jl:1105
 [3] rm(path::String; force::Bool, recursive::Bool)
   @ Base.Filesystem .\file.jl:283
 [4] rm
   @ .\file.jl:273 [inlined]
 [5] CSV.File(ctx::CSV.Context, chunking::Bool)
   @ CSV C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:344
 [6] File
   @ C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:227 [inlined]
 [7] #File#32
   @ C:\Users\oscar\.julia\packages\CSV\cwX2w\src\file.jl:223 [inlined]
 [8] top-level scope
   @ REPL[45]:1

Julia Version 1.11.0-rc1
Commit 3a35aec36d (2024-06-25 10:23 UTC)
Build Info:
Official https://julialang.org/ release
Platform Info:
OS: Windows (x86_64-w64-mingw32)
CPU: 16 × 11th Gen Intel(R) Core(TM) i7-11800H @ 2.30GHz
WORD_SIZE: 64
LLVM: libLLVM-16.0.6 (ORCJIT, tigerlake)
Threads: 16 default, 0 interactive, 8 GC (on 16 virtual cores)
Environment:
JULIA_EDITOR = code

CSV v0.10.14

dat.gz file is attached.

Note: it works fine on the raw data.

@JakeZw
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JakeZw commented Oct 15, 2024

Problem persists with 1.11.0 using an example from the CSV documentation. See discourse post for more information.

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