fix install by pip

Kitaolab · Apr 9, 2024 · a141e55 · a141e55
1 parent 4ea9329
commit a141e55
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Showing 2 changed files with 8 additions and 8 deletions.
diff --git a/README.md b/README.md
@@ -21,7 +21,7 @@ We believe our package will benefit your research.
 
 ~~~shell
 # Install all feautres of PaCS-ToolKit
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[all]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[all]"
 ~~~
 
 see [document](https://kitaolab.github.io/PaCS-Toolkit/) for more information.
@@ -36,7 +36,7 @@ conda create -n pacs "python>=3.7" -y
 conda activate pacs
 
 # Install all features of PaCS-ToolKit
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[all]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[all]"
 ~~~
 
 see [document](https://kitaolab.github.io/PaCS-Toolkit/) for more information.

diff --git a/docs/src/install.md b/docs/src/install.md
@@ -26,13 +26,13 @@ conda activate pacsmd
 
 - if using whole pacstk function
 ~~~shell
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[all]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[all]"
 pip install pyemma
 ~~~
 
 - elif using "pacs mdrun" and analyzer == "mdtraj"
 ~~~shell
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[mdtraj]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[mdtraj]"
 ~~~
 
 - elif using "pacs mdrun" and analyzer == "gromacs"
@@ -42,19 +42,19 @@ pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git"
 
 - elif performing MSM
 ~~~shell
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[msm]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[msm]"
 pip install pyemma
 ~~~
 
 ### 1.2. Install by pip
 - if using whole pacstk function
 ~~~shell
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[all]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[all]"
 ~~~
 
 - elif using "pacs mdrun" and analyzer == "mdtraj"
 ~~~shell
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[mdtraj]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[mdtraj]"
 ~~~
 
 - elif using "pacs mdrun" and analyzer == "gromacs"
@@ -64,7 +64,7 @@ pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git"
 
 - elif performing MSM
 ~~~shell
-pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#[msm]"
+pip install "git+https://github.com/Kitaolab/PaCS-Toolkit.git#egg=pacs[msm]"
 pip install pyemma
 ~~~