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25 Open 43 Closed
25 Open 43 Closed
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Issues list

License is confusing bug
#139 opened Sep 13, 2024 by hyandell
Unable to run test cases bug
#138 opened Feb 28, 2024 by stkgo
scprep.io.download.download_google_drive failing due to google api changes bug
#132 opened Jun 27, 2022 by atong01
scprep install_github tests are failing bug
#127 opened Feb 23, 2022 by scottgigante-immunai
scprep slingshot tests are failing bug
#126 opened Feb 23, 2022 by scottgigante-immunai
Explicitly return lineages from scprep.run.slingshot.Slingshot enhancement
#122 opened Jun 17, 2021 by alex-claman
Density subsampling enhancement
#106 opened Jun 8, 2020 by scottgigante
1
download_google_drive doesn't notify of permissions errors bug
#105 opened May 29, 2020 by scottgigante
Helper function to run scanpy louvain / leiden and produce a desired number of clusters enhancement
#102 opened May 6, 2020 by dburkhardt
How to re-order legends when using scprep.plot.rotate_scatter3 question
#100 opened Mar 17, 2020 by scottgigante
4
Rotate jitterplot 90 degrees enhancement
#93 opened Oct 24, 2019 by scottgigante
scprep.plot.graph() enhancement help wanted
#89 opened Oct 12, 2019 by dburkhardt v1.2
scprep.plot.scatter should handle bad matplotlib axis limits wontfix
#87 opened Oct 9, 2019 by scottgigante
4
scprep.select.select_* is ambiguous with modified RangeIndex bug help wanted question
#83 opened Oct 8, 2019 by scottgigante
Implement scran enhancement help wanted
#82 opened Oct 7, 2019 by scottgigante v1.1
Implement SCTransform enhancement help wanted
#81 opened Oct 7, 2019 by scottgigante v1.1
Use sklearn.decomposition.IncrementalPCA for scprep.reduce.pca with sparse data enhancement
#79 opened Oct 5, 2019 by scottgigante
Add support for Diffusion Pseudotime in scprep.run enhancement help wanted
#75 opened Oct 1, 2019 by dburkhardt
1 of 2 tasks
v1.1
5
Add save functions to scprep.io enhancement help wanted
#66 opened Aug 29, 2019 by scottgigante v1.1
@scottgigante
Want the ability to specify order of groups in scprep.plot.jitter enhancement help wanted
#65 opened Aug 21, 2019 by beaudoinlab
scprep.plot.histogram doesn't accept categorical input enhancement good first issue help wanted
#63 opened Aug 12, 2019 by dburkhardt
We need scprep.select.columns() enhancement help wanted
#61 opened Aug 8, 2019 by dburkhardt v1.1
@dburkhardt
4
Helper function to search if gene in dataframe.columns enhancement help wanted
#46 opened Jun 12, 2019 by dburkhardt
@dburkhardt
2
Set x/ylim in scprep.plot enhancement good first issue help wanted
#45 opened Jun 12, 2019 by dburkhardt v1.1
1
Splatter - Add metadata as dataframes for cell / gene info enhancement good first issue help wanted
#36 opened Apr 10, 2019 by dburkhardt
@dburkhardt
1
ProTip! Adding no:label will show everything without a label.