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Update many dependencies #855

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Jul 26, 2024
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46 changes: 23 additions & 23 deletions gradle.properties
Original file line number Diff line number Diff line change
Expand Up @@ -63,7 +63,7 @@ windowsProteomicsBinariesVersion=1.0
artifactoryPluginVersion=4.31.9
gradleNodePluginVersion=3.5.1
gradlePluginsVersion=3.0.1
owaspDependencyCheckPluginVersion=10.0.2
owaspDependencyCheckPluginVersion=10.0.3
versioningPluginVersion=1.1.2

# Versions of node and npm to use during the build. If set, these versions
Expand Down Expand Up @@ -103,7 +103,7 @@ apacheDirectoryVersion=2.1.3
apacheMinaVersion=2.2.1

# Keep in sync with springBootTomcatVersion below
apacheTomcatVersion=10.1.25
apacheTomcatVersion=10.1.26

# (mothership) -> json-path -> json-smart -> accessor-smart
# (core) -> graalvm
Expand All @@ -114,8 +114,8 @@ asmVersion=9.7
batikVersion=1.17

# sync with Tika version (or later)
bouncycastlePgpVersion=1.78
bouncycastleVersion=1.78
bouncycastlePgpVersion=1.78.1
bouncycastleVersion=1.78.1

cglibNodepVersion=2.2.3

Expand All @@ -126,21 +126,21 @@ checkerQualVersion=3.31.0
commonsBeanutilsVersion=1.9.4
commonsCollectionsVersion=3.2.2
commonsCollections4Version=4.4
commonsCodecVersion=1.17.0
commonsCompressVersion=1.26.1
commonsCodecVersion=1.17.1
commonsCompressVersion=1.26.2
commonsDbcpVersion=1.4
commonsDiscoveryVersion=0.2
commonsDigesterVersion=1.8.1
commonsIoVersion=2.16.1
commonsLangVersion=2.6
commonsLang3Version=3.14.0
commonsLang3Version=3.15.0
commonsLoggingVersion=1.3.3
commonsMath3Version=3.6.1
commonsPoolVersion=1.6
commonsTextVersion=1.12.0
commonsValidatorVersion=1.9.0

datadogVersion=1.37.0
datadogVersion=1.37.1

dom4jVersion=2.1.4

Expand All @@ -156,20 +156,20 @@ fopVersion=2.9

# Force latest for consistency
googleAutoValueAnnotationsVersion=1.10.4
googleErrorProneAnnotationsVersion=2.28.0
googleErrorProneAnnotationsVersion=2.29.2
googleHttpClientVersion=1.44.2
googleOauthClientVersion=1.36.0
googleProtocolBufVersion=3.25.3

graalVersion=24.0.1
graalVersion=24.0.2

# Cloud and SequenceAnalysis bring gson in as a transitive dependency.
# We resolve to the later version here to keep things consistent
# Note: Current jclouds seems to require 2.8.9; attempting to upgrade to 2.9.0 cratered the S3 test suite with many
# "java.lang.NoSuchMethodError: 'void com.google.gson.internal.ConstructorConstructor.<init>(java.util.Map)'" errors
gsonVersion=2.8.9

grpcVersion=1.65.0
grpcVersion=1.65.1

guavaVersion=33.2.1-jre

Expand All @@ -190,10 +190,10 @@ httpclientVersion=4.5.14
httpcoreVersion=4.4.16

# Jackson dependencies are usually released in tandem, but occasionally one gets a patch release out-of-sync with the others
jacksonVersion=2.17.1
jacksonAnnotationsVersion=2.17.1
jacksonDatabindVersion=2.17.1
jacksonJaxrsBaseVersion=2.17.1
jacksonVersion=2.17.2
jacksonAnnotationsVersion=2.17.2
jacksonDatabindVersion=2.17.2
jacksonJaxrsBaseVersion=2.17.2

jamaVersion=1.0.3

Expand Down Expand Up @@ -226,7 +226,7 @@ jsr305Version=3.0.2

orgJsonVersion=20240303

jsoupVersion=1.17.2
jsoupVersion=1.18.1

junitVersion=4.13.2

Expand All @@ -245,7 +245,7 @@ mssqlJdbcVersion=12.6.3.jre11
mysqlDriverVersion=9.0.0

# forced compatibility between docker and UserReg-WS
nettyVersion=4.1.110.Final
nettyVersion=4.1.112.Final

objenesisVersion=1.0

Expand All @@ -257,7 +257,7 @@ openTracingVersion=0.33.0
oracleJdbcVersion=23.4.0.24.05

# sync with version Tika ships
pdfboxVersion=2.0.31
pdfboxVersion=2.0.32

# sync with version Tika ships
poiVersion=5.2.5
Expand All @@ -279,19 +279,19 @@ romeVersion=2.1.0
servletApiVersion=6.0.0

# this version is forced for compatibility with pipeline and tika
slf4jLog4j12Version=2.0.12
slf4jLog4j12Version=2.0.13
# this version is forced for compatibility with api, LDK, and workflow
slf4jLog4jApiVersion=2.0.12
slf4jLog4jApiVersion=2.0.13

# This is a dependency for HTSJDK. Force version for CVE-2023-43642
snappyJavaVersion=1.1.10.5

springBootVersion=3.3.1
springBootVersion=3.3.2
# This usually matches the Tomcat version dictated by springBootVersion
# Also, keep this in sync with apacheTomcatVersion above
springBootTomcatVersion=10.1.25
springBootTomcatVersion=10.1.26
# This usually matches the Spring Framework version dictated by springBootVersion
springVersion=6.1.10
springVersion=6.1.11

sqliteJdbcVersion=3.46.0.0

Expand Down