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treelikelihood should set useAmbuguities=true as default #166

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walterxie opened this issue Oct 24, 2024 · 0 comments
Closed

treelikelihood should set useAmbuguities=true as default #166

walterxie opened this issue Oct 24, 2024 · 0 comments
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critical change the bug fix or new feature will significant change the code enhancement New feature or request

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the LPhyBeast PhyloCTMC treelikelihood should have as default useAmbuguities=true.

The XML produced should be something like:

<distribution id="D.treeLikelihood" spec="ThreadedTreeLikelihood" tree="@tree" useAmbiguities="true">
@walterxie walterxie added enhancement New feature or request critical change the bug fix or new feature will significant change the code labels Oct 24, 2024
walterxie added a commit that referenced this issue Oct 24, 2024
@walterxie
treelikelihood should set useAmbuguities=true as default #166
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