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updating utils.py, toml file and the docs
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BahmanTahayori committed Sep 18, 2024
1 parent 87965f4 commit 8743aca
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2 changes: 1 addition & 1 deletion docs/faq.rst
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Expand Up @@ -131,7 +131,7 @@ and signal leakage from in-slice and multi-slice accelleration may violate this
We have one option that is generally useful and is also a partial solution.
``--ica_method robustica`` will run `robustica`_.
This is a method that, for a given number of PCA components,
will repeated run ICA and identify components that are stable across iterations.
will repeatedly run ICA and identify components that are stable across iterations.
While running ICA multiple times will slow processing, as a general benefit,
this means that the ICA results are less sensitive to the initialization parameters,
computer hardware, and software versions.
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4 changes: 2 additions & 2 deletions pyproject.toml
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Expand Up @@ -30,8 +30,8 @@ dependencies = [
"pandas>=2.0,<=2.2.2",
"pybtex",
"pybtex-apa-style",
"robustica>=0.1.4",
"scikit-learn>=0.21, <=1.5.1",
"robustica>=0.1.4,<=0.1.4",
"scikit-learn>=0.21, <=1.5.2",
"scipy>=1.2.0, <=1.14.1",
"threadpoolctl",
"tqdm",
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4 changes: 4 additions & 0 deletions tedana/utils.py
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Expand Up @@ -18,12 +18,14 @@
from nilearn._utils import check_niimg
from numpy import __version__ as numpy_version
from pandas import __version__ as pandas_version
from robustica import __version__ as robustica_version
from scipy import __version__ as scipy_version
from scipy import ndimage
from scipy.special import lpmv
from sklearn import __version__ as sklearn_version
from sklearn.utils import check_array
from threadpoolctl import __version__ as threadpoolctl_version
from tqdm import __version__ as tqdm_version

LGR = logging.getLogger("GENERAL")
RepLGR = logging.getLogger("REPORT")
Expand Down Expand Up @@ -615,9 +617,11 @@ def get_system_version_info():
"nilearn": nilearn_version,
"numpy": numpy_version,
"pandas": pandas_version,
"robustica": robustica_version
"scikit-learn": sklearn_version,
"scipy": scipy_version,
"threadpoolctl": threadpoolctl_version,
"tqdm": tqdm_version,
}

return {
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