[DOC] Add fMRIPrep collection information to FAQ

[tsalo]

Closes #717.

Changes proposed in this pull request:

• Add information about collecting fMRIPrep data (with gist) to FAQ.
• Link to new FAQ in other sections.

[tsalo]

I cancelled almost all of the jobs because this is a docs PR. Can restart later as long as the RTD test looks good.

[tsalo]

It looks great, but if anyone knows how to limit the embedded window to a certain number of lines (like how it is with permalinks in GitHub issues/PRs), that would be awesome.

[codecov]

Codecov Report

Merging #773 (28050e9) into main (3147e01) will not change coverage.
The diff coverage is n/a.

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##             main     #773   +/-   ##
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  Coverage   93.20%   93.20%           
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  Files          27       27           
  Lines        2209     2209           
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  Hits         2059     2059           
  Misses        150      150           

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[eurunuela]

LGTM! Thank you @tsalo

[dowdlelt]

Maybe have something that points to the original issue, #717 so that when this closes it, and it (inevitably?) breaks, people could quickly reopen this.

[tsalo]

Thanks @dowdlelt. Added in b9209f0.

[eurunuela]

Lovely, thank you @tsalo !

[jbteves]

Looks good to me, thanks @tsalo ! It looks particularly nice to have the gist embedded, awesome.

[AaronAngJW]

Hi there,

Is there any possibility of adding a couple more information as to how to properly use this collect_fmriprep.py function?

• When exactly do you call this process in the script?
• What to expect if the function was ran successfully?
• How to then integrate the output of this function onto the actual tedana process.

It'd be really really nice if we can even get some sort of graphical guide that could aid this process.