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verku committed Jun 20, 2022
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<img src="docs/source/img/logga_viridis2.png" alt="logo" width="25%"/>

<sub>_(C) Jonas Söderberg_</sub>

GitHub repository for GenErode, a Snakemake pipeline for the analysis
of whole-genome sequencing data from historical and modern samples to
study patterns of genome erosion.
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If you've used GenErode to produce results, please cite our paper:

Kutschera VE, Kierczak M, van der Valk T, von Seth J, Dussex N, Lord E, Dehasque M, Stanton DWG, Emami P, Nystedt B, Dalén L, Díez-del-Molino D. GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species. BMC Bioinformatics 23, 228 (2022). https://doi.org/10.1186/s12859-022-04757-0
Kutschera VE, Kierczak M, van der Valk T, von Seth J, Dussex N, Lord E, Dehasque M, Stanton DWG, Emami P, Nystedt B, Dalén L, Díez-del-Molino D (2022) GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species. BMC Bioinformatics 23, 228 https://doi.org/10.1186/s12859-022-04757-0

## Pipeline overview

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You should have received a copy of the GNU General Public License
along with this program. If not, see <https://www.gnu.org/licenses/>.


Logo: Jonas Söderberg

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