Use new MARBL interface to initialize Chl #501

	name: Code coverage

	on: [push, pull_request]

	jobs:
	build-coverage:

	runs-on: ubuntu-latest
	defaults:
	run:
	working-directory: .testing

	steps:
	- uses: actions/checkout@v3
	with:
	submodules: recursive

	- uses: ./.github/actions/ubuntu-setup

	- uses: ./.github/actions/testing-setup

	- name: Compile file parser unit tests
	run: make -j build/unit/test_MOM_file_parser

	- name: Run file parser unit tests
	run: make run.cov.unit

	- name: Compile unit testing
	run: make -j build.unit

	- name: Run (single processor) unit tests
	run: make run.unit

	- name: Report unit test coverage to CI
	run: make report.cov.unit
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

	- name: Compile ocean-only MOM6 with code coverage
	run: make -j build/cov/MOM6

	- name: Run coverage tests
	run: make -j -k run.cov

	- name: Report coverage to CI
	run: make report.cov
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

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