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Merge pull request #80 from NOAA-EMC/AlexanderRichert-NOAA-patch-1 #58

Merge pull request #80 from NOAA-EMC/AlexanderRichert-NOAA-patch-1

Merge pull request #80 from NOAA-EMC/AlexanderRichert-NOAA-patch-1 #58

Workflow file for this run

# This is a GitHub CI workflow for the NCEPLIBS-ncio project.
#
# This workflow runs the intel compiler.
#
# Ed Hartnett 1/12/23
name: Intel
on:
push:
branches:
- develop
pull_request:
branches:
- develop
# Use custom shell with -l so .bash_profile is sourced which loads intel/oneapi/setvars.sh
# without having to do it in manually every step
defaults:
run:
shell: bash -leo pipefail {0}
jobs:
Intel:
runs-on: ubuntu-latest
env:
CC: mpicc
FC: mpifort
steps:
- uses: actions/checkout@v2
# See https://software.intel.com/content/www/us/en/develop/articles/oneapi-repo-instructions.html
- name: install-dependencies
run: |
sudo apt-get update
sudo apt-get install libmpich-dev
cd /tmp
wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
sudo apt-get update
sudo apt-get install intel-oneapi-dev-utilities intel-oneapi-openmp intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic
echo "source /opt/intel/oneapi/setvars.sh" >> ~/.bash_profile
- name: cache-netcdf
id: cache-netcdf
uses: actions/cache@v2
with:
path: ~/netcdf
key: Linux-netcdf-c-4.7.4-${{ runner.os }}1
- name: build-hdf5
if: steps.cache-netcdf.outputs.cache-hit != 'true'
run: |
export CC=mpicc
wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.7/src/hdf5-1.10.7.tar.gz &> /dev/null
tar -xzf hdf5-1.10.7.tar.gz
pushd hdf5-1.10.7
./configure --prefix=${HOME}/netcdf --enable-parallel --disable-tools --disable-fortran --disable-cxx --enable-parallel-tests
make -j2 VERBOSE=1
make install
- name: build-netcdf-c
if: steps.cache-netcdf.outputs.cache-hit != 'true'
run: |
export CPPFLAGS=-I${HOME}/netcdf/include
export LDFLAGS=-L${HOME}/netcdf/lib
wget https://github.com/Unidata/netcdf-c/archive/refs/tags/v4.7.4.tar.gz
tar -xzf v4.7.4.tar.gz
cd netcdf-c-4.7.4
./configure --prefix=${HOME}/netcdf --disable-dap --disable-utilities
make -j2 VERBOSE=1
make install
- name: build-netcdf-fortran
if: steps.cache-netcdf.outputs.cache-hit != 'true'
run: |
export PATH="${HOME}/netcdf/bin:$PATH"
export CPPFLAGS=-I${HOME}/netcdf/include
export LDFLAGS=-L${HOME}/netcdf/lib
wget https://github.com/Unidata/netcdf-fortran/archive/v4.5.3.tar.gz &> /dev/null
tar -xzf v4.5.3.tar.gz
pushd netcdf-fortran-4.5.3
./configure --prefix=${HOME}/netcdf
make -j2 VERBOSE=1
make install
- name: build and test
run: |
mkdir build && cd build
cmake -DCMAKE_PREFIX_PATH='~;~/netcdf' ..
make -j2 VERBOSE=1
ctest --verbose --output-on-failure --rerun-failed