+Add remapping of auxiliary variables in restarts #233
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@@ Coverage Diff @@
## dev/gfdl #233 +/- ##
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- Coverage 37.17% 37.09% -0.08%
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Files 263 263
Lines 73221 73368 +147
Branches 13638 13672 +34
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+ Hits 27218 27219 +1
- Misses 40978 41121 +143
- Partials 5025 5028 +3
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There's a conflict here, do you want to resolve it? I can do it, but it will create a new commit. |
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Added a new logical argument to interpolate_column to specify whether the interpolated interface values outside of massless layers should be masked to zero. Also refactored the code in interpolate_column to separate out the determination of the interface position from the interpolation and the masking to facilitate the extension of this code to use higher order interpolation in planned subsequent changes. All answers are bitwise identical, although there is a new mandatory argument for a public interface.
Added ALE_remap_interface_vals and ALE_remap_vertex_vals to handle the interpolation of variables that are at the interfaces atop tracer cells or above the corners of the tracers cells from one grid to another. Because these are not yet used (but have been tested in calls that will be added with the next commit) all answers are bitwise identical, but there are two new publicly visible routines.
Added REMAP_AUXILIARY_VARS to control whether to remap the accelerations that are used in the predictor step of the split RK2 time stepping scheme. Also added the new routines remap_dyn_split_rk2_aux_vars, remap_OBC_fields and remap_vertvisc_aux_vars to do the remapping, and code to call these routines when REMAP_AUXILIARY_VARS is true. By default, REMAP_AUXILIARY_VARS is false, and all answers are bitwise identical, but the entire MOM6-examples regression suite has been run with this set to true, and they do appear to give physically plausible answers in all cases, partially addressing the issue noted at github.com/NOAA-GFDL/issues/203. New entries are added to the MOM_parameter_doc files, and there are three new publicly visible routines, but by default answers do not change.
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Gaea regression: https://gitlab.gfdl.noaa.gov/ogrp/MOM6/-/pipelines/17502 ✔️ 🟡 New parameter:
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marshallward
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marshallward
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POSIX: siglongjmp and sigsetjmp_missing fixes
This was referenced Apr 6, 2023
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This PR consists of a series of commits that add the capability, selected at
runtime via the new parameter REMAP_AUXILIARY_VARS, to remap all of the 3-d
variables that are registered for restarts but were not previously remapped.
This PR addresses the issue at github.com//issues/203 in cases
using ALE remapping, but it may also be worthwhile to examine this issue in
non-ALE cases as well. There are several new interfaces and a new runtime
parameter, so the contents of the MOM_parameter_doc files change, but by
default all answers are bitwise identical.
The commits in this PR include:
(This PR was updated via a force-push at 6 AM on 11/18/2022 to correct bugs found during its review.)