ruff fix imports order

NPLinker · Dec 14, 2023 · b645894 · b645894
1 parent 68cae76
commit b645894
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Showing 13 changed files with 13 additions and 13 deletions.
diff --git a/src/nplinker/loader.py b/src/nplinker/loader.py
@@ -24,9 +24,9 @@
 from nplinker.pairedomics.downloader import PODPDownloader
 from nplinker.pairedomics.runbigscape import run_bigscape
 from nplinker.pairedomics.strain_mappings_generator import podp_generate_strain_mappings
+from nplinker.strain import Strain
 from nplinker.strain_collection import StrainCollection
 from nplinker.strain_loader import load_user_strains
-from nplinker.strain import Strain
 
 
 try:

diff --git a/src/nplinker/metabolomics/load_gnps.py b/src/nplinker/metabolomics/load_gnps.py
@@ -7,8 +7,8 @@
 from nplinker.metabolomics import Spectrum
 from nplinker.metabolomics.gnps import GNPSFormat
 from nplinker.metabolomics.gnps import gnps_format_from_file_mapping
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 
 
 logger = LogConfig.getLogger(__name__)

diff --git a/src/nplinker/metabolomics/molecular_family.py b/src/nplinker/metabolomics/molecular_family.py
@@ -1,7 +1,7 @@
 from __future__ import annotations
 from typing import TYPE_CHECKING
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 
 
 if TYPE_CHECKING:

diff --git a/src/nplinker/metabolomics/spectrum.py b/src/nplinker/metabolomics/spectrum.py
@@ -1,5 +1,5 @@
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 from nplinker.utils import sqrt_normalise
 
 

diff --git a/src/nplinker/pairedomics/strain_mappings_generator.py b/src/nplinker/pairedomics/strain_mappings_generator.py
@@ -6,8 +6,8 @@
 from nplinker.metabolomics.gnps import GNPSFileMappingLoader
 from nplinker.schemas import GENOME_BGC_MAPPINGS_SCHEMA
 from nplinker.schemas import validate_podp_json
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 from .podp_antismash_downloader import GenomeStatus
 from .podp_antismash_downloader import get_best_available_genome_id
 

diff --git a/src/nplinker/scoring/linking/data_links.py b/src/nplinker/scoring/linking/data_links.py
@@ -13,8 +13,8 @@
 
 
 if TYPE_CHECKING:
-    from nplinker.strain_collection import StrainCollection
     from nplinker.strain import Strain
+    from nplinker.strain_collection import StrainCollection
 
 logger = LogConfig.getLogger(__name__)
 

diff --git a/tests/conftest.py b/tests/conftest.py
@@ -2,8 +2,8 @@
 from nplinker.globals import STRAIN_MAPPINGS_FILENAME
 from nplinker.metabolomics import Spectrum
 from nplinker.metabolomics.metabolomics import load_spectra
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 from . import DATA_DIR
 from . import GNPS_DATA_DIR
 

diff --git a/tests/genomics/test_gcf.py b/tests/genomics/test_gcf.py
@@ -1,8 +1,8 @@
 import pytest
 from nplinker.genomics import BGC
 from nplinker.genomics import GCF
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 
 
 @pytest.fixture()

diff --git a/tests/genomics/test_genomics.py b/tests/genomics/test_genomics.py
@@ -10,8 +10,8 @@
 from nplinker.genomics import map_bgc_to_gcf
 from nplinker.genomics import map_strain_to_bgc
 from nplinker.globals import GENOME_BGC_MAPPINGS_FILENAME
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 from .. import DATA_DIR
 
 

diff --git a/tests/pairedomics/test_strain_mappings_generator.py b/tests/pairedomics/test_strain_mappings_generator.py
@@ -7,8 +7,8 @@
 from nplinker.pairedomics import get_mappings_strain_id_bgc_id
 from nplinker.pairedomics import get_mappings_strain_id_spectrum_id
 from nplinker.pairedomics import podp_generate_strain_mappings
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 
 
 def test_podp_generate_strain_mappings(monkeypatch, tmp_path):

diff --git a/tests/scoring/conftest.py b/tests/scoring/conftest.py
@@ -6,8 +6,8 @@
 from nplinker.scoring import MetcalfScoring
 from nplinker.scoring.linking import DataLinks
 from nplinker.scoring.linking import LinkFinder
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 from .. import DATA_DIR
 
 

diff --git a/tests/test_strain_collection.py b/tests/test_strain_collection.py
@@ -1,7 +1,7 @@
 import json
 import pytest
-from nplinker.strain_collection import StrainCollection
 from nplinker.strain import Strain
+from nplinker.strain_collection import StrainCollection
 
 
 @pytest.fixture

diff --git a/tests/test_strain_loader.py b/tests/test_strain_loader.py
@@ -1,7 +1,7 @@
 import json
 import pytest
-from nplinker.strain_loader import load_user_strains
 from nplinker.strain import Strain
+from nplinker.strain_loader import load_user_strains
 
 
 @pytest.fixture