chore: add spikeThresh #222
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| name: Build all NML Java | |
| on: | |
| push: | |
| branches: [ master, development, experimental, documentation_update, osb* ] | |
| pull_request: | |
| branches: [ master, development, experimental, documentation_update, osb* ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| java: [ '8', '11', '16', '17', '19' ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up JDK ${{ matrix.java }} | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: ${{ matrix.java }} | |
| java-package: jdk | |
| distribution: 'adopt' | |
| - name: Install NeuroML 2 with Maven | |
| run: | | |
| java -version | |
| mvn install | |
| - name: Install jNeuroML | |
| run: | | |
| export main_repo_branch=${GITHUB_REF##*/} | |
| if [[ ${main_repo_branch} != "master" && ${main_repo_branch} != "development" && ${main_repo_branch} != "experimental" && ${main_repo_branch} != *"osb"* ]]; then main_repo_branch=development ; fi | |
| echo Using branch $main_repo_branch | |
| git clone https://github.com/NeuroML/jNeuroML.git | |
| cd jNeuroML | |
| git checkout $main_repo_branch | |
| python getNeuroML.py $main_repo_branch # will call mvn install on this & other repos | |
| ls -alt | |
| mvn dependency:tree | |
| ./jnml -v | |
| cd .. | |
| - name: Install OMV | |
| run: | | |
| pwd | |
| echo $GITHUB_WORKSPACE | |
| export PATH=$PATH:$GITHUB_WORKSPACE/jNeuroML | |
| export JNML_HOME=$GITHUB_WORKSPACE/jNeuroML | |
| pip install git+https://github.com/OpenSourceBrain/osb-model-validation | |
| omv list -V | |
| env | |
| pip freeze | |
| - name: Test examples using OMV | |
| run: | | |
| cd $GITHUB_WORKSPACE/NeuroML2/LEMSexamples | |
| omv all -V --engine=jNeuroML --ignore-non-py3 | |
| omv list -V |