MAINT: Final setting for chapter 3 #182
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python | |
| name: Pytest | |
| on: | |
| push: | |
| branches: ["main" , "develop"] | |
| pull_request: | |
| branches: ["main" , "develop"] | |
| jobs: | |
| test: | |
| name: Test installation | |
| runs-on: ubuntu-latest | |
| env: | |
| OMP_NUM_THREADS: 1 | |
| MKL_NUM_THREADS: 1 | |
| NUMEXPR_NUM_THREADS: 1 | |
| OPENBLAS_NUM_THREADS: 1 | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| architecture: x64 | |
| miniconda-version: "latest" | |
| channel-priority: flexible | |
| channels: conda, conda-forge | |
| use-only-tar-bz2: true | |
| auto-update-conda: true | |
| auto-activate-base: true | |
| activate-environment: test | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| echo ${{ github.workspace }} | |
| # sudo apt-get install libglu1-mesa libxrender1 libxcursor1 libxft2 libxinerama1 ffmpeg libsm6 libxext6 | |
| sudo apt-get install gdb libglu1 | |
| conda install -c conda-forge petsc | |
| conda install -c conda-forge petsc4py | |
| python -m pip install --upgrade pip | |
| python -m pip install --upgrade -r requirements.txt | |
| - name: Install nfempy | |
| run: | | |
| python -m pip install . | |
| python -m pip freeze | |
| - name: Test geometry | |
| run: | | |
| python -m pytest tests/test_geometry | |
| - name: Test meshing | |
| run: | | |
| python -m pytest tests/test_meshing | |
| - name: Test PETSc import | |
| run: | | |
| python -c 'from petsc4py import PETSc' | |
| - name: Test l2-projectors | |
| run: | | |
| export OPENBLAS_NUM_THREADS=1 | |
| export OPENBLAS_MAIN_FREE=1 | |
| gdb -ex r -ex bt --args python -m pytest tests/test_projectors |