linux python-package.yml #25
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python | |
| name: Python package | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| # - uses: actions/checkout@v3 | |
| # - name: Set up Python ${{ matrix.python-version }} | |
| # uses: actions/setup-python@v3 | |
| # with: | |
| # python-version: ${{ matrix.python-version }} | |
| # architecture: x64 | |
| # cache: 'pip' | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| architecture: x64 | |
| miniconda-version: "latest" | |
| channels: anaconda, conda-forge | |
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
| auto-update-conda: true | |
| auto-activate-base: true | |
| - name: Install dependencies | |
| run: | | |
| # sudo apt-get update | |
| # sudo apt-get upgrade | |
| sudo apt-get install libglu1 | |
| conda init bash | |
| conda create -y --name nfempy | |
| conda activate nfempy || true | |
| # # install a message passing interface and mpi4py | |
| # sudo apt-get install libopenmpi-dev # alt.: conda install -c conda-forge openmpi | |
| # pip install --user mpi4py # alt.: conda install -c anaconda mpi4py | |
| # # install petsc and and petsc4py | |
| # conda install -c conda-forge petsc | |
| # conda install -c conda-forge petsc4py | |
| python -m pip install --upgrade pip | |
| python -m pip install pytest | |
| python -m pip install --upgrade --upgrade-strategy eager -r requirements.txt | |
| # python -m pip install --upgrade cython | |
| # python -m pip install mpi4py petsc #petsc4py | |
| conda install -c conda-forge petsc | |
| conda install -c conda-forge petsc4py | |
| #- name: Lint with flake8 | |
| # run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| # flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| # flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| run: | | |
| pytest |