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STRetch v0.4.0

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@hdashnow hdashnow released this 22 Jan 00:57
· 19 commits to master since this release
v0.4.0
ce74895
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Learn about vigilant mode.

Major changes:

  • Introduces an exome bam pipeline: allows running STRetch directly from exomes in bam format

Minor changes/bugfixes

  • Add unit tests and coverage reports
  • Add tests for identify_locus.py and its dependencies, and refactor these to aid testing
  • Round off floating point numbers in result STR.tsv files
  • identify_locus.py sorts bed inputs by default
  • Fix some paths pipeline_config_template.groovy
Assets 2
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