Fix IO issues for 'io.network_from_csv' #984
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| name: Tests | |
| on: [pull_request] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash | |
| strategy: | |
| fail-fast: false | |
| max-parallel: 9 | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11'] | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| include: | |
| - os: ubuntu-latest | |
| path: ~/.cache/pip | |
| - os: macos-latest | |
| path: ~/Library/Caches/pip | |
| - os: windows-latest | |
| path: ~\AppData\Local\pip\Cache | |
| steps: | |
| - name: Cache pip | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ matrix.path }} | |
| key: ${{ runner.os }}-pip-${{ hashFiles('setup.py') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| pip install \ | |
| -r requirements.txt \ | |
| -r requirements/tests.txt | |
| - name: Install pypardiso on non-macOS | |
| if: (matrix.os != 'macos-latest') | |
| run: | | |
| pip install pypardiso | |
| - name: Disable numba JIT for codecov to include jitted methods | |
| if: (matrix.python-version == 3.9) && (matrix.os == 'ubuntu-latest') | |
| run: | | |
| echo "NUMBA_DISABLE_JIT=1" >> $GITHUB_ENV | |
| - name: Running tests | |
| run: | |
| pytest . | |
| --cov=. | |
| --cov-report=xml | |
| --color=yes | |
| - name: Upload coverage to Codecov | |
| if: (matrix.python-version == 3.9) && (matrix.os == 'ubuntu-latest') | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| flags: unittests | |
| name: codecov-umbrella | |
| - name: flake8 Lint | |
| if: (matrix.python-version == 3.9) && (matrix.os == 'ubuntu-latest') | |
| uses: py-actions/flake8@v2 | |
| with: | |
| ignore: "D100,E226,E402,E712,E741,F401,F403,N806,W503,WPS111,WPS211,WPS237,WPS300,WPS305,WPS319,WPS347,WPS410,WPS437" | |
| exclude: "docs/,scripts/,tests/,openpnm/contrib/,setup.py,openpnm/models/_doctxt.py,openpnm/models/phase/_phasedocs.py,openpnm/models/geometry/_geodocs.py" | |
| max-line-length: "90" | |
| path: ".." |