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updates with conda install directions
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holtjma committed May 22, 2023
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# Installing HiFiCNV
## Instructions
## From conda
The easiest way to install HiFiCNV is through [conda](https://docs.conda.io/projects/conda/en/stable/user-guide/install/index.html):

```bash
# create a brand new conda environment and install latest HiFiCNV
conda create -n hificnv -c bioconda hificnv
# OR install latest into current conda environment
conda install hificnv
# OR install a specific version into current conda environment
conda install hificnv=0.1.6b
```

## From GitHub
Conda updates usually lag the GitHub release by a couple days.
Use the following instructions to get the most recent version directly from GitHub:

1. Navigate to the [latest release](https://github.com/PacificBiosciences/HiFiCNV/releases/latest) and download the tarball file (e.g. `hificnv-{version}-x86_64-unknown-linux-gnu.tar.gz`).
2. Decompress the tar file.
3. (Optional) Verify the md5 checksum.
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