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HiFiCNV initial release

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@holtjma holtjma released this 23 Feb 19:29
· 14 commits to main since this release

Initial release for HiFiCNV:

  • Ingests a HiFi aligned BAM file for read depth
  • Calculates copy number estimates using read depth
  • Outputs copy number changes relative to expected values into a VCF file
  • Additionally provides auxiliary data tracks for visualization