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HiFiCNV v1.0.0
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@ctsa ctsa released this 27 Mar 18:26
· 2 commits to main since this release
v1.0.0
1e8e35c

v1.0.0 - 2024-03-27

This release includes minor ease-of-use improvements, CNV output should be unchanged. The release version is updated to 1.0 to reflect that HiFiCNV is now operating as a stable part of our HiFi WGS pipeline.

Added

  • Add progress reporter to alignment scan

Changed

  • Accelerate depth bin GC content computation
    • Improve and parallelize algorithm to reduce fixed runtime overhead by ~5 min for human genome analysis with typical thread counts.

Fixed

  • Improve error message for failed depth estimation (#25)
  • Improve error message for unmapped BAM input (#24)
  • Improve error message for mismatched reference and BAM chromosomes (#23)
  • Improve error message when BAM index is missing (#22)
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