Skip to content

pb-StarPhase v0.9.1
Compare
Choose a tag to compare
@holtjma holtjma released this 11 Apr 20:06
· 35 commits to main since this release
v0.9.1
2afd4b7
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Learn about vigilant mode.

Changes

  • The CLI settings log output has been updated for easier human readability
  • Exposed three new CLI options that influence how the CYP2D6 algorithm works: --min-consensus-fraction, --min-consensus-count, and --dual-max-ed-delta. Most users should not need to modify the defaults.

Fixed

  • Improved the allele chaining algorithm to reduce errors with hybrid CYP2D6 allele copy-number counts
  • Fixed the CYP2D6 star allele output to be in coding order (i.e. reverse relative to before)
  • Fixed the PharmCAT TSV output to use simple CYP2D6 representation
Assets 3
Loading