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Update test_nnunetv2runner #13627

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Run time

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Job	Run time
min-dep-py3 (3.8)	5m 15s
min-dep-py3 (3.9)	5m 23s
min-dep-pytorch (1.9.1)	5m 19s
min-dep-os (windows-latest)	8m 29s
min-dep-py3 (3.10)	5m 23s
min-dep-pytorch (1.10.2)	5m 29s
min-dep-os (macOS-latest)	12m 50s
min-dep-py3 (3.11)	5m 7s
min-dep-pytorch (1.11.0)	5m 13s
min-dep-os (ubuntu-latest)	5m 7s
min-dep-pytorch (1.12.1)	5m 18s
min-dep-pytorch (1.13)	5m 55s
min-dep-pytorch (latest)	6m 19s
	1h 21m 7s