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Add 2d diffusion model bundle #408

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merged 81 commits into from
May 16, 2023
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Can-Zhao
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@Can-Zhao Can-Zhao commented May 7, 2023

Fixes # .

Description

Add 2d diffusion model bundle
Update 3d diffusion model bundle with retrained weights

Status

Ready/Work in progress/Hold

Please ensure all the checkboxes:

  • Codeformat tests passed locally by running ./runtests.sh --codeformat.
  • In-line docstrings updated.
  • Update version and changelog in metadata.json if changing an existing bundle.
  • Please ensure the naming rules in config files meet our requirements (please refer to: CONTRIBUTING.md).
  • Ensure versions of packages such as monai, pytorch and numpy are correct in metadata.json.
  • Descriptions should be consistent with the content, such as eval_metrics of the provided weights and TorchScript modules.
  • Files larger than 25MB are excluded and replaced by providing download links in large_file.yml.
  • Avoid using path that contains personal information within config files (such as use /home/your_name/ for "bundle_root").

Can-Zhao and others added 25 commits May 2, 2023 12:53
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
@Can-Zhao Can-Zhao marked this pull request as ready for review May 8, 2023 14:07
Can-Zhao added 2 commits May 8, 2023 07:13
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
@Can-Zhao
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please also prepare a file like: https://github.com/Project-MONAI/model-zoo/blob/dev/ci/install_scripts/install_brats_mri_generative_diffusion_dependency.sh for this bundle, thanks in advance!

I reused this one. They have same dependency

Can-Zhao added 9 commits May 15, 2023 08:17
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
ci/verify_bundle.py Outdated Show resolved Hide resolved
Can-Zhao and others added 2 commits May 15, 2023 20:02
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
Can-Zhao added 8 commits May 15, 2023 21:53
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Can-Zhao <volcanofly@gmail.com>
@yiheng-wang-nv
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/build

@yiheng-wang-nv yiheng-wang-nv merged commit 86c616b into Project-MONAI:dev May 16, 2023
yiheng-wang-nv added a commit to yiheng-wang-nv/model-zoo that referenced this pull request Jul 29, 2024
Fixes # .

### Description
Add 2d diffusion model bundle 
Update 3d diffusion model bundle with retrained weights

### Status
**Ready/Work in progress/Hold**

### Please ensure all the checkboxes:
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Codeformat tests passed locally by running `./runtests.sh
--codeformat`.
- [ ] In-line docstrings updated.
- [ ] Update `version` and `changelog` in `metadata.json` if changing an
existing bundle.
- [ ] Please ensure the naming rules in config files meet our
requirements (please refer to: `CONTRIBUTING.md`).
- [ ] Ensure versions of packages such as `monai`, `pytorch` and `numpy`
are correct in `metadata.json`.
- [ ] Descriptions should be consistent with the content, such as
`eval_metrics` of the provided weights and TorchScript modules.
- [ ] Files larger than 25MB are excluded and replaced by providing
download links in `large_file.yml`.
- [ ] Avoid using path that contains personal information within config
files (such as use `/home/your_name/` for `"bundle_root"`).

---------

Signed-off-by: Can-Zhao <volcanofly@gmail.com>
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Yiheng Wang <vennw@nvidia.com>
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3 participants