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Change loc doc url #515

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merged 2 commits into from
Dec 19, 2024
Merged

Change loc doc url #515

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adb5095
Change loc doc url
RobbinBouwmeester Dec 19, 2024
27e3c81
Merge branch 'main' into Location-doc-url
RobbinBouwmeester Dec 19, 2024
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20 changes: 5 additions & 15 deletions webinterface/pages/2_Quant_LFQ_ion_DDA.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -57,9 +57,7 @@ def _main_page(self) -> None:

with tab_results_all:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -70,9 +68,7 @@ def _main_page(self) -> None:
with tab_submission_details:
st.title(self.variables_dda_quant.texts.ShortMessages.title)

st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -83,9 +79,7 @@ def _main_page(self) -> None:
with tab_indepth_plots:
st.title(self.variables_dda_quant.texts.ShortMessages.title)

st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -95,9 +89,7 @@ def _main_page(self) -> None:
# Tab 3: Results (New Submissions)
with tab_results_new:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -108,9 +100,7 @@ def _main_page(self) -> None:
# Tab 4: Public Submission
with tab_public_submission:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand Down
20 changes: 5 additions & 15 deletions webinterface/pages/3_Quant_LFQ_ion_DIA_AIF.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -61,9 +61,7 @@ def _main_page(self) -> None:
# Tab 1: Results (All Data)
with tab_results_all:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -73,9 +71,7 @@ def _main_page(self) -> None:
# Tab 2: Submission Details
with tab_submission_details:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -85,9 +81,7 @@ def _main_page(self) -> None:
# Tab 2.5: in-depth plots current data
with tab_indepth_plots:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -97,9 +91,7 @@ def _main_page(self) -> None:
# Tab 3: Results (New Submissions)
with tab_results_new:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -109,9 +101,7 @@ def _main_page(self) -> None:
# Tab 4: Public Submission
with tab_public_submission:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand Down
20 changes: 5 additions & 15 deletions webinterface/pages/4_Quant_LFQ_ion_DIA_diaPASEF.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -63,9 +63,7 @@ def _main_page(self) -> None:
# Tab 1: Results (All Data)
with tab_results_all:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -75,9 +73,7 @@ def _main_page(self) -> None:
# Tab 2: Submission Details
with tab_submission_details:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -87,9 +83,7 @@ def _main_page(self) -> None:
# Tab 2.5: in-depth plots current data
with tab_indepth_plots:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -99,9 +93,7 @@ def _main_page(self) -> None:
# Tab 3: Results (New Submissions)
with tab_results_new:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -111,9 +103,7 @@ def _main_page(self) -> None:
# Tab 4: Public Submission
with tab_public_submission:
st.title(self.variables_dia_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dia_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dia_quant.doc_url})")
if self.variables_dia_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand Down
20 changes: 5 additions & 15 deletions webinterface/pages/5_Quant_LFQ_peptidoform_DDA.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -67,9 +67,7 @@ def _main_page(self) -> None:

with tab_results_all:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -79,9 +77,7 @@ def _main_page(self) -> None:
# Tab 2: Submission Details
with tab_submission_details:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -91,9 +87,7 @@ def _main_page(self) -> None:
# Tab 2.5: in-depth plots current data
with tab_indepth_plots:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -103,9 +97,7 @@ def _main_page(self) -> None:
# Tab 3: Results (New Submissions)
with tab_results_new:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand All @@ -116,9 +108,7 @@ def _main_page(self) -> None:
# Tab 4: Public Submission
with tab_public_submission:
st.title(self.variables_dda_quant.texts.ShortMessages.title)
st.write(
f"The full description of the module is available [here]({self.variables_dda_quant.texts.ShortMessages.doc_url})"
)
st.write(f"The full description of the module is available [here]({self.variables_dda_quant.doc_url})")
if self.variables_dda_quant.beta_warning:
st.warning(
"This module is in BETA phase. The figure presented below and the metrics calculation may change in the near future."
Expand Down
1 change: 1 addition & 0 deletions webinterface/pages/pages_variables/Quant/lfq/ion/DDA/variables.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -60,3 +60,4 @@ class VariablesDDAQuant:
parse_settings_dir: str = "../proteobench/io/parsing/io_parse_settings/Quant/DDA"

texts: Type[WebpageTexts] = WebpageTexts
doc_url: str = "https://proteobench.readthedocs.io/en/latest/available-modules/2-quant-lfq-ion-dda/"
2 changes: 2 additions & 0 deletions webinterface/pages/pages_variables/Quant/lfq/ion/DIA/ion_diaPASEF.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -61,3 +61,5 @@ class VariablesDIAQuantdiaPASEF:
parse_settings_dir: str = "../proteobench/io/parsing/io_parse_settings/Quant/lfq/ion/DIA/diaPASEF"

texts: Type[WebpageTexts] = WebpageTexts

doc_url: str = "https://proteobench.readthedocs.io/en/latest/available-modules/5-quant-lfq-ion-dia-diapasef/"
2 changes: 2 additions & 0 deletions webinterface/pages/pages_variables/Quant/lfq/peptidoform/DDA/peptidoform_variables.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -60,3 +60,5 @@ class VariablesDDAQuant:
parse_settings_dir: str = "../proteobench/io/parsing/io_parse_settings/Quant/lfq/peptidoform/DDA"

texts: Type[WebpageTexts] = WebpageTexts

doc_url: str = "https://proteobench.readthedocs.io/en/latest/available-modules/3-quant-lfq-peptidoform-dda/"
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