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Python3 Script check #1840

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merged 7 commits into from
Dec 9, 2019
Merged

Python3 Script check #1840

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35df3e1
delete the script and example files no longer use
yunsiechung Nov 27, 2019
a1d842c
moved all the script example under example/scripts
yunsiechung Nov 27, 2019
fbf0807
added example for generateChemkimHTML.py
yunsiechung Nov 27, 2019
a8bfe6d
added an example for mergeModels.py
yunsiechung Nov 27, 2019
e8c774f
Example for generateFluxDiagram is added
yunsiechung Nov 27, 2019
fa822af
added an example for standardizeModelSpeceisNames
yunsiechung Nov 27, 2019
71f10d7
modified the description for generateTree script
yunsiechung Dec 3, 2019
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10 changes: 0 additions & 10 deletions examples/diffModels/example.sh
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2 changes: 0 additions & 2 deletions examples/reduction/example.sh
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2 changes: 0 additions & 2 deletions examples/reduction/example_parallel.sh
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372 changes: 0 additions & 372 deletions examples/reduction/minimal/chemkin/chem_annotated.inp
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60 changes: 0 additions & 60 deletions examples/reduction/minimal/input.py
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21 changes: 0 additions & 21 deletions examples/reduction/minimal/reduction_input.py
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0 examples/diffModels/Models/DFT_chem.inp → ...es/scripts/diffModels/Models/DFT_chem.inp
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0 ...fModels/Models/DFT_species_dictionary.txt → ...fModels/Models/DFT_species_dictionary.txt
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0 examples/diffModels/Models/Primary_chem.inp → ...cripts/diffModels/Models/Primary_chem.inp
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0 ...els/Models/Primary_species_dictionary.txt → ...els/Models/Primary_species_dictionary.txt
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10 changes: 10 additions & 0 deletions examples/scripts/diffModels/example.sh
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#!/bin/bash

# Normal Output
python ../../../scripts/diffModels.py Models/DFT_chem.inp Models/DFT_species_dictionary.txt Models/Primary_chem.inp Models/Primary_species_dictionary.txt

# Do not show identical species or reactions
#python ../../../scripts/diffModels.py Models/DFT_chem.inp Models/DFT_species_dictionary.txt Models/Primary_chem.inp Models/Primary_species_dictionary.txt --diffOnly

# Only show species or reactions that are present in both models but have different values
#python ../../../scripts/diffModels.py Models/DFT_chem.inp Models/DFT_species_dictionary.txt Models/Primary_chem.inp Models/Primary_species_dictionary.txt --commonDiffOnly
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