RMG-Py v2.1.8
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New features:
- Chlorine and iodine atom types have been added, bringing support for these elements to RMG-database
- Forbidden structures now support Molecule and Species definitions in addition to Group definitions
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Changes:
- Reaction pair generation will now fall back to generic method instead of raising an exception
- Removed sensitivity.py script since it was effectively a duplicate of simulate.py
- Thermo jobs in Cantherm now output a species dictionary
- Fitted atom energy corrections added for B3LYP/6-31g**
- Initial framework added for hydrogen bonding
- Renamed molepro module and associated classes to molpro (MolPro) to match actual spelling of the program
- Chemkin module is now cythonized to improve performance
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Fixes:
- Allow delocalization of triradicals to prevent hysteresis in resonance structure generation
- Fix reaction comment parsing issue with uncertainty analysis
- Fix numerical issue causing a number of pressure dependent RMG jobs to crash
- Template reactions from seed mechanisms are now loaded as library reactions if the original family is not loaded
- Fix issues with degeneracy calculation for identical reactants