xenobiotic-oyster

Repo for complilation of efforts designed to look at impact of contaminants on oysters.

Mentoring Plan

see also Influence of 17α-ethinylestradiol on DNA Methylation in Oysters (https://github.com/sr320/paper-Oyster-EE2)

1. Larval Pesticide

filtered_Y38_control_GTGAAA_L007	77	Y38-control	Yanouk
filtered_Y54_Mix_GTGGCC_L007	78	Y54-mix	Yanouk
filtered_Y38_control_GTGAAA_L005	77	Y38-control	Yanouk
filtered_Y54_Mix_GTGGCC_L005	78	Y54-mix	Yanouk

data http://owl.fish.washington.edu/nightingales/C_gigas/

2. Oil Exposure

see also https://github.com/sr320/paper-Cvirg-oil/blob/master/methods.md

2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_NoIndex_L001		OilvNoOil
2112_lane1_TGACCA_L001	97	HB30
2112_lane1_TTAGGC_L001	96	HB16
2112_lane1_TTAGGC_L001		HB16
2212_lane2_CTTGTA_L002	100	1000ppm
2212_lane2_GCCAAT_L002	99	400ppm


SRP139854
SRP139854
SRP139854