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4. Post classification structural analysis

Romain F. Laine edited this page Nov 25, 2018 · 1 revision

Performed by: PostAn_AnalyseStructures_BATCH.m

Input: This assumes that the output of ExtractObjects_fromImage_BATCH.m, ExtractDescriptors_BATCH.m and ML_PredictWithModel_RF_BATCH.m are present in the folders along with the reconstructed data.

Paramaters: The pixel sizes of the super-resolution images need to be given along with the ELM analysis parameters and the resolution limit of the image for convolution of the rod-shaped model (see paper for details)

Output: The code generates an excel spreadsheet for each dataset in the folder where each identified particles is associated with its structural parameters.