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@Starlitnightly Starlitnightly released this 30 Aug 12:30
· 16 commits to master since this release

Pl Module

  • Fixed the 'celltyep_key' error of ov.pl.cpdb_group_heatmap #109
  • Fixed an error in ov.utils.roe when some expected frequencies are less than expected value.
  • Added cellstackarea to visual the Percent stacked area chart of celltype in samples.

Single Module

  • Fixed the bug of ov.single.cytotrace2 when adata.X is not sparse data. #115, #116
  • Fixed the groupby error in ov.single.get_obs_value of SEACells.
  • Fixed the error of cNMF #107, #85
  • Fixed the plot error when Pycomplexheatmap version > 1.7 #136

Bulk Module

  • Fixed an key error in ov.bulk.Matrix_ID_mapping
  • Added enrichment_multi_concat in ov.bulk to concat the result of enrichment.
  • Fixed the pandas version error in gseapy #137

Bulk2Single Module

  • Added adata.var_names_make_unique() to avoid mat shape error if gene not unique. #100

Space Module

  • Fixed an error in construct_landscape of ov.space.STT
  • Fixed an error of get_image_idx_1D in ov.space.svg #117
  • Added COMMOT to calculate the cell-cell interaction of spatial RNA-seq.
  • Added starfysh to deconvolute spatial transcriptomic without scRNA-seq (#108)

PP Module

  • Updated constraint error of ov.pp.mde #129
  • Fixed type error of float128 #134