fix: pattern to get obs files for intercrop usms or not (get_file_)

SticsRPacks · Sep 6, 2024 · 6da433f · 6da433f
1 parent 4df2cee
commit 6da433f
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/R/get_file.R b/R/get_file.R
@@ -151,7 +151,9 @@ get_file_ <- function(workspace,
   if (length(workspace_files) && !is.null(usm_name)) {
     idx <- lapply(str2regex(usm_name),
                   function(y) {
-                    patt <- paste0(y, "\\.", file_ext)
+                    # using optional "p" or "a" in pattern for associated crops
+                    # p for principal crop, a for associated crop
+                    patt <- paste0(y, "[a|p]?\\.", file_ext)
                     grep(pattern = patt, x = workspace_files)
                   }
     )