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Microbiome-conferences-etc

This is the list of microbiome related conferences/meetings/workshops etc., mostly virtual and FREE.

Updated with recordings when available.

✉️ If you would like to share your microbiome-related event, feel free to let me know.

Also, check out:

and I wrote about the roles of Twitter in my academic life & how remote conferencing broadened my horizons and opened career paths.

👏 KUDOS to all organizers and speakers of virtual events from 2020 up until now!

2025

May

Conference: May 21-23 Applied Bioinformatics & Public Health Microbiology

January

🌐 Conference: January 21 & 22/23 Microbiome Virtual International Conference #MVIF

2024

Regular

🌐 Conference: Microbiome Virtual International Conference #MVIF Recordings available here.

Webinar: Klebsiella Seminar Series 2024

Webinar: Slovenian Microbiological Society & Slovenian Microbiome Network seminars

Webinar: February 14 – May 8 Exploring Microbial Ecosystems EMBL-EBI Training

Webinar: AHMRN Journal Club Australasian Human Microbiome Research Network.

Meetup: Decentralized Science NYC A monthly NYC meetup for science enthusiasts to learn, share projects, and socialize.

Webinar: BISMiS Live Recordings available here.

Webinar: Population Dynamics Virtual Seminars Recordings available here

Webinar: BIRBI Bioinformatics Seminar

DECEMBER

Webinar: December 11 BIRBI Bioinformatics Seminar: A bioinformatics strategy for the discovery of host-based biomarkers from human cell-free DNA in blood plasma by Alessandra Vittorini Orgeas.

Webinar: December 11 SEARCHER webinar: ARG Prediction

Webinar: December 11 New ISAPP Expert Recommendation: Scientific Criteria for Classifying Prebiotics

🌐 Conference: December 3/4 & 5 Microbiome Virtual International Conference #MVIF

Webinar: December 4 EMBARK WEBINAR final conclusions by JPIAMR funded program to search emerging Antimicrobial Resistance through monitoring the environmental resistome.

NOVEMBER

Webinar: November 29 Population Dynamics Virtual Seminars: The wisdom of the crowd: Watching microbial collectives (re)shape themselves by Sujit S. Datta

Webinar: November 26 AMI Webinar: connecting, inspiring and advocating for LGBTQIA+ researchers in microbiology

Webinar: November 22 Population Dynamics Virtual Seminars: How bacteria control self-attraction by Berenike Maier

Webinar: November 22 FEMS Microbiology Ecology Webinar on Microbial Impacts of Climate Change

Webinar: November 20 SEARCHER webinar: ARG Transmission

Conference: November 19-21 Future of the Microbiome: 2024 Winter Summit

Webinar: November 19 AHMRN Journal Club: Francine Marques

🌐 Conference: November 12 & 13/14 Microbiome Virtual International Conference #MVIF

Webinar: November 7 SMD online seminar 2024: dr. Petra Hribovsek (UIB, Norway) by Slovenian Microbiological Society.

Webinar: November 6 Meta-GP Symposium a hybrid event by the Meta-GP Program: share progress updates, discuss challenges associated with metagenomics, and gather to network across sites.

OCTOBER

Webinar: October 17 Microbiome Data Webinar Registration here

Course and Symposium: October 16-18 ISB Virtual Microbiome Series/A gut feeling: Microbes and their impacts on our minds

Webinar: October 15 EMBARK Final Results Webinar by JPIAMR funded program to search emerging Antimicrobial Resistance through monitoring the environmental resistome.

🌐 Conference: October 7/8 & 9 Microbiome Virtual International Conference #MVIF

Conference: October 1-2 African Microbiomes in Health and Disease Symposium

SEPTEMBER

Webinar: September 27 Seminars on Quantitative Life-Science, Biophysics, Ecology: Exploring interactions between human gut microbes by Karoline Faust Host: Rosalind Allen - Organiser: Marco Mauri.

Webinar: September 24 APBioNet Talks: Finding Antimicrobial peptides in the global microbiome using machine learning by Luis Pedro Coelho.

Webinar: September 18 SN Oncology Webinar Series: The microbiome in cancer immunotherapy

🌐 Conference: September 17 & 18/19 Microbiome Virtual International Conference #MVIF

Conference: September 16 African Microbiome Day 3.0: Showcasing microbiome research in Africa – Exploring Health, Ecosystems and Innovations

Hackathon: September 11-13 2. NFDI4Microbiota Knowledge Base Content & Coding Sprint

Conference: September 10-11 Breaking Barriers for Gender and Health Equity Through Research by Nature.

AUGUST

Meetup: August 1 Decentralized Science NYC "Wrecking My Gut For Fun and Science" with Scott Hickle of Throne Science.

JULY

JUNE

Event: June 27 World Microbiome Day - AHMRN Researcher Speed Dating

Webinar: June 26 EMBL webinar: Data visualisation principles for enhancing effective scientific communication

🌐 Conference: June 11/12 & 13 Microbiome Virtual International Conference #MVIF

MAY

Webinar: May 23 SMD online seminar 2024: dr. Maria Zimmermann

🌐 Conference: May 21 & 22/23 Microbiome Virtual International Conference #MVIF

Webinar: May 16 FEMS Microbiology Ecology Webinar on Insect-Microbiome Interactions

Webinar: May 7 NCCR Microbiomes Seminar Series Camille Goemans: The impact of antibiotics on the human gut microbiota

Symposium: May 13 Harvard Chan Microbiome Center Symposium: The Microbiome and Cancer

APRIL

Webinar: April 24 SEARCHER antimicrobial resistance webinar: ARG transmission. Speakers: Alvaro San Millan and Uli KlĂźmper.

Course: April 22-24 Study of microbial communities in freshwater: from isolation to -omics by CNR-IRSA Verbania.

Webinar: April 18 WAME seminar series: The Microbiome & Conservation https://aarhusuniversity.zoom.us/j/68868377912

🌐 Conference: April 16/17 & 18 Microbiome Virtual International Conference #MVIF

MARCH

Webinar: March 22 [Hybrid] Annual MIT Microbiome Symposium 2024

🌐 Conference: March 20 & 21/22 Microbiome Virtual International Conference #MVIF

Conference: March 13–15 Antimicrobial Resistance – Genomes, Big Data and Emerging Technologies – Wellcome Genome Campus, UK and Virtual; NOTE: To encourage more inclusive scientific discussions at our conferences, those living in LMIC (Lower and Middle Income Countries) can register to attend our virtual events for free.

Course: March 9–14 Antimicrobial Resistance in Bacterial Pathogens - Africa by National Institute for Communicable Diseases (NICD) - South Africa

FEBRUARY

Conference: February 29 Human Microbiome Action - Final Conference

🌐 Conference: February 26/27 & 28 Microbiome Virtual International Conference #MVIF

Webinar: February 26 Microbial “dark oxygen” production: An overlooked process in Earth’s hidden ecosystems MIT seminar by Dr Emil Ruff.

Webinar: February 14 – May 8 Exploring Microbial Ecosystems EMBL-EBI Training

Conference: February 14–16 Microbiome Interactions in Health and Disease by Wellcome Genome Campus. Note: delegates based in Lower and Middle-Income Countries can register for free.

Conference: February 6–7 Antimicrobial Chemotherapy Conference organised by GARDP and BSAC.

JANUARY

Symposium: January 18-19 10th Theodor Escherich Symposium on microbiome research Medizinische Universität Graz (Austria).

Forum: January 15 1st Ethiopian-Swiss Microbiome and AMR Forum

🌐 Conference: January 9 & 10/11 Microbiome Virtual International Conference #MVIF

Webinar: January 10 Green ERA-Hub Breakfast club series 6 This is a series of morning webinars targeted towards early career researchers interested in topics regarding Biotechnology to advance Sustainable Solutions for Bioeconomy.

2023

Regular

🌐 Conference: Microbiome Virtual International Conference #MVIF Recordings available here.

DECEMBER

🌐 Conference: December 18/19 & 20 Microbiome Virtual International Conference #MVIF

Symposium: December 8 Understanding and therapeutically targeting the microbiota-gut-brain-axis by Australasian Human Microbiome Research Network

Webinar: December 7 mSystems Thinking Series: Microbes and Sexual Health

Webinar: December 1 Population Dynamics Seminars with Sylvie Estrela (Stanford University).

NOVEMBER

Webinar: November 22 Episode 2: Navigating the Terrain of Infant Health: Unravelling the Gut Microbiome's Role and Roadblocks by UKRI GCRF Action against Stunting Hub.

🌐 Conference: November 14 & 15/16 Microbiome Virtual International Conference #MVIF

OCTOBER

Conference: October 26-27 2nd Microbiome PT Summit

Webinar: October 24 SMD seminar: Dr. Christian Jenul (University of Leicester, UK) by Slovenian Microbiology Society

Symposium: October 19 New Frontiers in Modelling Ecology and Evolution of Microbiomes organised by Xiu Jia and Marco Mauri (Friedrich Schiller University Jena)

🌐 Conference: October 16/17 & 18 Microbiome Virtual International Conference #MVIF

Course+Symposium: October 11-13 ISB Virtual Microbiome Series 2023

SEPTEMBER

Webinar: September 27 Microbiome Data Congress Pre-Conference Webinar

🌐 Conference: September 19 & 20/21 Microbiome Virtual International Conference #MVIF

Webinar: September 16 BISMiS Live - 28th Session with Giovanna Felis: Taxonomic revaluation of the “old” genus Lactobacillus: a boost for research and innovation

Symposium: September 11-12 2nd Young AMICI Symposium

JUNE

Webinar: June 27 World Microbiome Day 2023 Celebration: Transforming healthier food for a healthier planet

Webinar: June 27 Microbes and Food - World Microbiome Day by the Australasian Human Microbiome Research Network.

🌐 Conference: June 20/21 & 22 Microbiome Virtual International Conference #MVIF with Ami Bhatt.

Conference: June 19 6th AMICI Symposium by Austrian Microbiome Initiative.

MAY

Webinar: May 31 MASTERing food chain microbiomes

Course: May 22-26 GTN SmĂśrgĂĽsbord training course

🌐 Conference: Microbiome Virtual International Conference #MVIF

Conference: May 3-5 Applied Bioinformatics & Public Health Microbiology by Wellcome Genome Campus, UK and Virtual. Registration from LMIC countries is FREE!

APRIL

Webinar: April 10 SymbNET seminar on chemical-microbiome interactions and cell cycle regulation in Staphylococcus aureus

🌐 Conference: April 18/19 & 20 Microbiome Virtual International Conference #MVIF

Symposium: April 7 [Hybrid] Annual MIT Microbiome Symposium

MARCH

🌐 Conference: March 14 & 15/16 Microbiome Virtual International Conference #MVIF

Webinar: March 1 Microbes and Social Equity working group seminar: "The vaginal microbiome: key for women’s health & healthy newborns" by Dr. Sarah Lebeer

FEBRUARY

Webinar: February 22 Microbiome interactions with food and links to health by IFT British Section.

Webinar: February 22 The Bioinformatics seminar: SemiBin: using self-supervised deep learning for better metagenomics binning by Luis Pedro Coelho; organized by the Serbian Society for Bioinformatics and Computational Biology and Faculty of Mathematics, University of Belgrade.

Webinar: February 16 Mind, Mood & Microbes Expert Q&A

🌐 Conference: February 14/15 & 16 Microbiome Virtual International Conference #MVIF

Symposium: February 9 Therapeutic Promise of the Microbiome: The Dr. Paul Janssen Award Symposium

JANUARY

🌐 Conference: January 16 & 17/18 Microbiome Virtual International Conference #MVIF

2022

Regular

🌐 Conference: Microbiome Virtual International Conference #MVIF Recordings available here.

Course: Big Data Biology Lab bioinformatics tutorials

Webinar: #EMBARK2022 AMR webinars Recordings available here.

Webinar: Microbiome Centers Consortium (MCC) Seminar series by @AllMicrobiomes.

Webinar: Microbiome Webinar Series by The Vanderbilt Microbiome Innovation Center.

Webinar: BISMiS Live Recordings available here.

Webinar: Uppsala Antibiotic Center Recordings available here.

DECEMBER

🌐 Conference: December 13/14 & 14 Microbiome Virtual International Conference #MVIF with Amy D. Willis.

Conference: December 8 Microbiome Modulation of the Brain and other Biological Systems by The Australasian Human Microbiome Research Network.

Webinar: December 7 EMBARK webinar.

NOVEMBER

Conference: November 28 COMBINE Symposium 2022

Webinar: November 23 Faecal Microbiota Transplantation and the Clinical Potential of the Human Microbiome by Don Whitley Scientific.

Conference: November 17-18 9th Theodor Escherich Symposium on medical microbiome research

Webinar: November 9 EMBARK webinar.

🌐 Conference: November 8 & 9/10 Microbiome Virtual International Conference #MVIF with Sarah Lebeer.

OCTOBER

Course+Symposium: October 12-14 ISB Virtual Microbiome Series

Webinar: October 3 London Microbiome Meeting 2022 Online by Department of Twin Research & Department of Nutritional Sciences at KCL.

🌐 Conference: October 17/18 & 19 Microbiome Virtual International Conference #MVIF with Elisabeth Bik.

Webinar: October 5 EMBARK webinar.

SEPTEMBER

Course: September 22-23 Keep your Project on Track! Plan for Efficient and Reusable Research by deNBI.

Conference: September 21-23 Genome Informatics 2022 by Wellcome Genome Campus. Note: delegates based in Lower and Middle-Income Countries can register for free.

Webinar: September 14 EMBARK webinar.

🌐 Conference: September 13 & 14/15 Microbiome Virtual International Conference #MVIF with Eric Pamer.

AUGUST ⛱️

JULY ⛱️

Webinar: July 19 ABACBS monthly seminar series Anna Trigos: Spatial analysis to dissect the tumour immune microenvironment & Ben Woodcroft: New tools for genome-centric metagenomics

Webinar: July 6 Reference-free and Ecology-based Analysis on High Quality-controlled Data in Human Microbiome Studies discussion initiated by Liping Zhao.

Webinar: July 5 - September 27 OSU Microbiome Informatics Webinar Series - Summer 2022 on Tuesdays by the CoMS.

JUNE

Conference: June 27-29 MicrobiomeSupport Final Conference: Paving the Microbiome Way by EUFIC - the European Food Information Council.

Conference: June 21 UK Biobank Scientific Conference 2022 by UK Biobank.

Webinar: June 21 MEWE Webinar: Microbial Immigration in Engineered Ecosystems by IWA MEWE.

🌐 Conference: June 14/15 & 16 Microbiome Virtual International Conference #MVIF with Kenya Honda.

Webinar: June 15 EMBARK Webinar with Marisa Haenni.

Course: June 14 SemiBin for metagenomic binning by Big Data Biology Lab

Conference: June 9 Novozymes Prize Symposium: (Federating) Bioinformatics tools and resources with Peer Bork and colleagues.

Webinar: June 3 C-DEBI meeting: The Many Ways to Use Anvi’o, a Platform for Microbial ‘Omics by Iva Veseli.

MAY

Webinar: May 25 FMT Meet-Up by NĂĄdia Amorim from the AHMRN.

Course: May 20, 27 & June 3, 10 Beginners guide to 16S Microbial Analysis by Matthew Snelson from the AHMRN.

Webinar: May 18 EMBARK Webinar with Nichole Broderick.

Webinar: May 18 Microbiome Webinar 2022: The diverse roles of human and animal gut microbiota in health and disease, organized by Don Whitley Scientific. Recordings available here.

Conference: May 16 The fourth annual Harvard Chan Microbiome in Public Health Center (HCMPH) symposium The Microbiome and Chronic Diseases

🌐 Conference: May 10 & 11/12 Microbiome Virtual International Conference #MVIF with Wendy Garrett.

Webinar: May 6 UAC AMR seminar with Maria Selmer & Diarmaid Hughes.

APRIL

Conference: April 29 MIT Microbiome Symposium

Conference: April 27–29 Antimicrobial Resistance – Genomes, Big Data and Emerging Technologies (Virtual Conference) by Wellcome Genome Campus, UK. Note: delegates from Lower and Middle-Income Countries (LMIC) can register for FREE.

Webinar: April 16 #BISMiSLive: Special Dialogue on "SeqCode: an alternative code for naming the uncultivated"

Webinar: April 13 EMBARK Webinar with Ramanan Laxminarayan: State of the World’s Antibiotics 2022.

🌐 Conference: April 11/12 & 13 Microbiome Virtual International Conference #MVIF with Suhelen Egan.

MARCH

Conference: March 25 The 8th annual BCB symposium: The future of bioinformatics

Webinar: March 22 New Ideas in Microbiome Research by Australasian Human Microbiome Research Network.

Webinar: March 16 EMBARK Webinar with Windi Muziasari (Global database of ARGs in the environment) and Anna Abramova (Meta-analysis reveals the global picture of antibiotic resistance gene prevalence across environments).

🌐 Conference: March 8 & 9/10 Microbiome Virtual International Conference #MVIF with Willem De Vos.

Webinar: March 7 MEWE Webinar:qPCR? What is it good for? Absolutely some things. by IWA MEWE. Recordings available here.

Conference: March 3 The 4th annual York Microbiology Symposium (YMS2022)

FEBRUARY

Webinar: February 11 Microbes in your drinking water with Emmanuelle Prest and Frederik Hammes.

Webinar: February 10 EBNet Webinar: Using Big Data Approaches to Understand Microbial Communities. Recordings available here.

Webinar: February 10 Health Sciences Seminar Series: Bioreactors as tools to study the human gut microbiome: from bench to bedside and beyond by Emma Allen-Vercoe.

Webinar: February 9 Microbiome Webinar Series with Molly Bletz, organized by The Vanderbilt Microbiome Innovation Center.

🌐 Conference: February 8 & 9 Microbiome Virtual International Conference #MVIF with Susan Holmes.

Webinar: February 2 #hilifewebinars: The Dark Side of Science: Misconduct in Biomedical Research by Elisabeth Bik.

JANUARY

Webinar: January 26 Homewood Research Institute talks: Mysteries of the Microbiome: Exploring the Gut-Brain Connection by Emma Allen-Vercoe.

Webinar: January 19 Microbiome Webinar Series by The Vanderbilt Microbiome Innovation Center: Fibre, blood pressure and the gut microbiome by Francine Marques.

Conference: January 13 & 14 2nd Global Microbiome Network – GloMiNe – Symposium for Africa

🌐 Conference: January 11 & 13 Microbiome Virtual International Conference #MVIF with Eran Elinav.

Webinar: January 11 #SGBUG Online Seminar: The Dark Side of Science: Misconduct in Biomedical Research by Dr Elisabeth Bik. Registration here.

2021

Regular

Webinar: Microscopy live! an hour of live electron microscopy by Plymouth Electron Microscopy Centre

Webinar: Microbial Genomics Seminar Series by Microbiology Society UK

Webinar: Open science coffee ☕ by Open Science Community Delft

Webinar: Microbiome Series by @ICENICentre

Webinar: The MicroTalks seminar series hosted by the @asm_tmc is looking for speakers!

  • Microtalks takes place at 4PM on the last Wednesday of every month!

Webinar: #EMBARK2021 AMR webinars. Recordings available here

Webinar: University of Nottingham Sutton Bonington AMR Webinar Series 2021; Webinar Link

Webinar: Brain-Body Interactions virtual seminar series

  • every Monday

Webinar: Microbiome Informatics webinars

  • Spring 2021 (Tuesdays 1-3 EST)

Webinar: SymbNET Online Seminar Series Monthly seminars on host-microbe symbiosis, genomics, and metabolomics, with two talks from SymbNET researchers.

Webinar: NCCR Microbiomes Seminar Series The bimonthly NCCR Microbiomes Seminar Series alternates internal NCCR progress reports and seminars given by external invited speakers.

DECEMBER

Webinar: December 16 SymbNET Online Seminar Series Monthly seminars on host-microbe symbiosis, genomics, and metabolomics, with two talks from SymbNET researchers.

Webinar: December 16 Seamposium: The seagrass microbiome by Gerard Muyzer

Webinar: December 15 EMBARK Webinar Willem van Schaik – “Metagenomic approaches to understand the spread of antibiotic resistance genes in microbial ecosystems” & Svetlana Ugarcina Perovic – Exploring the global resistome using the global microbial gene catalog

🌐 Conference: December 8 & 9 Microbiome Virtual International Conference #MVIF with Jonathan Eisen.

Webinar: December 8 FMT Superheroes Connect by Australasian Human Microbiome Research Network.

Webinar: December 7-9 The Future of the Microbiome 2021 Summit

Webinar: December 6 Gut Microbiome and Cardiovascular Disease Satellite Symposium by the High Blood Pressure Council Research Council of Australia and Monash University

Webinar: December 6 Reference-free and ecology-based data analysis for understanding gut microbiome in human health and diseases by Liping Zhao

NOVEMBER

Webinar: November 30 NCCR Microbiomes Seminar Series The bimonthly NCCR Microbiomes Seminar Series alternates internal NCCR progress reports and seminars given by external invited speakers.

Webinar: November 25 SymbNET Online Seminar Series Monthly seminars on host-microbe symbiosis, genomics, and metabolomics, with two talks from SymbNET researchers.

Webinar: November 24 Sports Nutrition, Gut Microbiome & Athletic Health by Yakult Europe

Webinar: November 24 EMBARK Webinar Nikolina Udikovic Kolic – “Pharmaceutical waste and antimicrobial resistance” & Ulrike Löber – “Drugs as antidotes – How drugs affect the damage on gut commensals under antibiotics course”

Conference: November 22 COMBINE Symposium 2021 20 September – Abstract submissions close.

Webinar: November 18 #SGBUG Online Seminar: Natacha Ruiz – Transporting lipids to build the outer membrane in Gram-negative bacteria. Registration here.

Webinar: November 16 MIT Microbiome Club: Predicting and designing human gut microbiome functions by Ophelia Venturelli.

Webinar: November 10 EMBARK Webinar Michael Baym – “Exploring non-anthropic selective pressures on antibiotic resistance”

Webinar: November 3 #TrendingNow: Putting the Biggest Gut Health Trends Under the Microscope by The Canadian Digestive Health Foundation (CDHF); open access to the talks on demand until January 30, 2022.

Webinar: November 2 NCCR Microbiomes Seminar Series The bimonthly NCCR Microbiomes Seminar Series alternates internal NCCR progress reports and seminars given by external invited speakers.

Course: November 2 SemiBin for metagenomic binning by Big Data Biology Lab

OCTOBER

Conference: October 28-29 Forsyth Scientific Symposium: Oral Microbiome—Beyond Bacteria

Webinar: October 28 London Microbiome Meeting by the Dept of Twin Research & Dept of Nutritional Sciences

Conference: October 21-22 8th Theodor Escherich - and AMICI Symposium 2021 (joint meeting) "The medical perspective of microbiome research"

Webinar: October 21 IMMSA webinar Microbiome Standards Development at LGC - Denise O'Sullivan & Accounting for Taxonomic Bias in Metagenomics Experiments - Michael McLaren( NCSU) by The International Microbiome and Multi-Omics Standards Alliance

Webinar: October 21 SymbNET Online Seminar Series Monthly seminars on host-microbe symbiosis, genomics, and metabolomics, with two talks from SymbNET researchers.

Course: October 15 Workshop on Statistical and Machine Learning Techniques for Microbiome Data Analysis by ML4Microbiome

Conference: October 13/15 (Pacific/Atlantic) Microbiome Virtual International Conference #MVIF

Conference: October 13-15 Microbiome Interactions in Health and Disease #MIHD21 Wellcome Genome Campus, UK

Course+Conference: October 13-15 2021 ISB Virtual Microbiome Series by Institute for Systems Biology. Recordings available here. Materials and presentations available here.

Conference: October 14 Grand Challenges of Data-Intensive Science in microbiome & metagenome data analysis and training by ML4Microbiome

Webinar: October 13 The dark side of science: Misconduct in Biomedical Research by Elisabeth Bik and Boris Barbour – Netherlands Research Integrity Network

Webinar: October 13 EMBARK Webinar: Barry McMahon – "How AMR in wildlife can inform zoonoses research" and Victor Hugo Jarquin Diaz – "AMR spread in rodents"

Webinar: October 12 GSBI Speaks webinar: "Ecological networks in belowground communities" by Global Soil Biodiversity Initiative. Recordings available here.

Hackathon: October 11-13 Bioinformatics tools and methods for AMR in bacteria by the Public Health Alliance for Genomic Epidemiology (PHA4GE), the Joint Programming Initiative on Antimicrobial Resistance (JPIAMR) and the Climb Big Data.

Webinar: October 11-12 Workshop on Education in Food Systems Microbiome Related Sciences: Needs for Universities, Industry and Public Health Systems by MicrobiomeSupport

Webinar: October 6 The impact of preprints for early career researchers by ASAPbio

Webinar: October 5 NCCR Microbiomes Seminar Series The bimonthly NCCR Microbiomes Seminar Series alternates internal NCCR progress reports and seminars given by external invited speakers.

Course: October 4-8 2nd de.NBI Summer School 2021 - Microbial Community Analysis by de.NBI

Webinar: October 4 Pathogen Surveillance in Agriculture, Food and the Environment (PATH-SAFE) by UK Microbiology Society

SEPTEMBER

Webinar: September 30 SymbNET Online Seminar Series Monthly seminars on host-microbe symbiosis, genomics, and metabolomics, with two talks from SymbNET researchers.

Course: September 29 - October 1 Snakemake BYOC (bring-your-own-code) workshop by NBIS – National Bioinformatics Infrastructure Sweden

Conference: September 28-30 Genomic population structures of microbial pathogens. Recordings available here.

Conference: September 28 Black in Microbiology week 2021 Research Day by Black Microbiologists Association. Recordings available here.

Course: September 27, October 1 and 4 Metagenome-atlas: Three commands to start analysing your metagenome data by Silas Kieser

Conference: September 22-24 The European Culture Collections Organisation XXXIX by MIRRI

Conference: September 20 Iceman - quo vadis? Virtual Symposium for the Iceman's 30th anniversary.

Conference: September 19-21 Small Proteins in Prokaryotes, an Unexplored World” (SPP 2002 by the Deutsche Forschungsgemeinschaft

Webinar: September 18 Marike Palmer: Microbial species concepts - the status quo in the -omics era by BISMiS

Webinar: September 16-17 International Microorganism Day a 24-hour live stream of microorganism-themed learning & activities

Course: September 15-16 Data management plan for Beginners by the de.NBI

Course: September 15-16 A day in the life of a bioinformatician 2021 by COMBINE

Webinar: September 15 Driving New Discovery with Precision Microbiome Analysis & Advanced AI by Microba Life Sciences

Conference: September 14/16 (Atlantic/Pacific) Microbiome Virtual International Conference #MVIF

Course: September 8-10 Workshop on Plotting in R by NBIS – National Bioinformatics Infrastructure Sweden

Webinar: September 9 Computational and Systems Biology Symposium by eLife. Recordings available here.

Conference: September 8 Microbiome Superheroes Connect by Australasian Human Microbiome Research Network @microbiome_net; Speaker Registration here; More info here Recordings available here.

Webinar: September 7 Convergence Of Circadian Rhythms And Gut Microbes: Maintaining The Metronome Of Life by Vanessa Leone, organized by @IAFNS_science

Webinar: September 7 NCCR Microbiomes Seminar Series The bimonthly NCCR Microbiomes Seminar Series alternates internal NCCR progress reports and seminars given by external invited speakers.

Course: September 6 Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R by the Wellcome Genome Campus

Course: September 6-7 Intro to Data, Shell, Git and GitHub, Python Software Carpentry by ZB MED and de.NBI

Webinar: September 2 Food for health through the gut microbiome: How will we get there? by the Nebraska Food for Health Center

Webinar: September 1 and 22 EMBARK Fall Webinars – a webinar series where invited speakers will be presenting their AMR research and be contrasted to EMBARK members presenting the work performed in the project.

Webinar: September 1 “What is a bioinformatics postdoc?” Zoom Q&A by the Australian Bioinformatics And Computational Biology Society. Recording available here.

Webinar: September 1 Open science coffee ☕: Research Code Review by Open Science Community Delft. Recording and summary available here.

AUGUST ⛱️

Course: Aug 25, 2021 - Aug 26, 2021 | 9:00AM - 12:30PM Asia/Singapore Introduction to AWS for genomic analysis by Amazon Web Services and the Genome Institute of Singapore

Hackathon: Petabyte-Scale Sequence Search: Metagenomics Benchmarking Codeathon Application deadline August 20; Event Dates and Time: Sept. 27-Oct. 1, 1-5 p.m. EDT. Organized by the National Institutes of Health (NIH) Office of Data Science Strategy, the National Center for Biotechnology and Information at the National Library of Medicine, and the Department of Energy's (DOE) Office of Biological and Environmental Research.

Conference: August 20 Global Microbiome Symposium 2021 by West Coast Microbiome Network

JULY

Course: July 27-29 First steps with R by ELIXIR Luxembourg

Conference: July 20-22 The International Conference on Group B Strep (ICGBS)

Tutorial: July 19 Organizing data analyses in Python using Jug by Big Data Biology Lab

Webinar: July 17 #BISMiSLive @BISMiS_ Aharon Oren "Naming New Taxa of Prokaryotes in the 21st Century"

Conference: July 15 World Enterococcus Day; registration here; program here

Webinar: July 15 #SGBUG Online Seminar: "Sweet flagellins - Not all are equal" Patrick Viollier; Registration here

Course: July 14-16 Reproducible analysis workflows with Snakemake and Conda by ELIXIR Luxembourg; course material

Webinar: July 14 The Microbiome Revolution – a new era in small animal gastroenterology? by Silke Salavati

Course: July 12-16 Multi-omics Modeling of Biochemical Pathways Summer School by EMSL

Conference: July 12–15 BiATA2021 Bioinformatics: from Algorithms to Applications

Conference: July 6-9 Biotechnology for the Built Environment Annual Summit 2021 by HBBE

Tutorial: July 5 metagenomics processing with NGLess by Big Data Biology Lab

Webinar: July 1 How can we make clinically meaningful progress in microbiome-related therapeutics development? CATS-Milner Therapeutic Perspectives Series: Microbiome therapeutics by Cambridge Academy of Therapeutic Sciences

JUNE

Webinar: June 30 LSfM Lecture Series & Workshops 2019-2021, From Single Organisms to Systems Ecology and Evolution: "The Dark Side of Science: Misconduct in Biomedical Research" Dr. Elisabeth Bik; more info here

Webinar: June 30 #EMBARK2021w/ @KimInSingapore @inanna_nalytica

Conference: June 28-29 Italian Congress of Pharmaceutical Microbiology "The gut microbiota:a key player for human health" Live streaming here

Webinar: June 27 World Microbiome Day by @WMicrobiomeDay Registration here

Conference: June 27-29 #IHMC21 International Human Microbiome Consortium Congress 2021

Tutorial: June 25 metagenomics processing with NGLess by Big Data Biology Lab

Conference: June 20-24 #WorldMicrobeForum @ASMicrobiology @FEMSmicro

Webinar: June 19 #BISMiSLive @BISMiS_ Wen-Jun Li "Mining the Microbial Dark Matter: Challenges and Opportunities"

Webinar: June 18 Women in Data Science 2021 – Perspectives in Industry and Academia

Symposium: June 15 Metaproteomics Symposium @MetaP_Init Registration linek here

Congress: June 9-10 #MicrobiomeData Congress

Webinar: June 9 #EMBARK2021 w/ @DearbhaileMK @RabaabZ https://antimicrobialresistance.eu/2021/03/26/embark-spring-webinars/

Webinar: June 7-11 #BVCN Holistic Bioinformatic Approaches used in Microbiome Research

Course: Advanced R for Bioinformatics Summer School

  • Application deadline: May 4, 2021
  • No fee this year!

MAY

Webinar: May 27 (2 pm UTC) Institut Pasteur seminars in bioinformatics: C. Titus Brown "Lightweight and large scale (meta)genome analysis: chasing strain variation acroos a million genomes!" Link

Conference: May 5-7 Applied Bioinformatics and Public Health Microbiology (Virtual Conference)

Course: From ZERO to HERO in ML, 8 weeks MOOC: building predictive models with scikit-learn and gaining a practical understanding of the strengths and limitations of ML

APRIL

Webinar: April 29, (2 pm UTC) Institut Pasteur seminars in bioinformatics: Alexis Stamatakis "Current and Future Research in Phylogenetics" Link

Course: High-performance scientific computing using JULIA (2021-04-22)

Webinar: April 19 (07:30 AM UTC) The Who, What and How of Microbiome Data

Workshop: April 13-14 Free 2-day workshop: Machine Learning in Genomics: Tools, Resources, Clinical Applications and Ethics by NHGRI Genomic Data Science Working Group of the National Advisory Council for Human Genome Research

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