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Split school types #385

Merged
merged 376 commits into from
Oct 20, 2023
Merged

Split school types #385

merged 376 commits into from
Oct 20, 2023

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twallema
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  • I have checked to ensure there aren't other open Pull Requests for the same update/change
  • I made sure all new and existing data sets have a description in the data/README.md file
  • I have updated the documentation accordingly.

Describe your fixes/additions/changes
Split primary, secondary and tertiary education

@twallema
update of RESTORE 8
a5dd726
@twallema
Merge remote-tracking branch 'upstream/master'
6ebb6b3
@twallema
Merge remote-tracking branch 'upstream/master'
20b5c21
@twallema
Merge branch 'master' into RESTORE-8-updates
478f4e2
@twallema
update data
425c345
@twallema
bring vaccination function in line with previous bugfix
5c7411b
@twallema
expand dims on ICUrec and remove subtraction of dUCUrec with dICU_R
fb49e68
@twallema
vectorize vaccination implementation
6cc5861
@twallema
working first- and second dose vaccination function
7742b74
@twallema
working multidose model
556d273
@twallema
implement a draw function for the stratified vaccination model
62c3be5
@twallema
format vaccination functions of both models and update docstrings
35e4295
@twallema
all changes to notebook and models.py
ad234da
@twallema
Merge branch 'RESTORE-8-updates'
7c58f23
@twallema
update policies
1766490
@twallema
update data
a35fde7
@twallema
tryout calibration script
348dc8b
@twallema
plot PSO stratified function
c8e96c5
@twallema
changes to notebook
b013a05
@twallema
update data
afe7692
@twallema
adjusted samples location in function run_MCMC
443a365
@twallema
Experiment with different ensemble moves
bbe5017
@twallema
reduce number of dimensions down to time (irregardless of dims in out)
8612548
@twallema
bring draw function in line with new calibration
3562de2
@twallema
adjust output_to_visuals to sum over all dims except time/draws
2f87566
@twallema
tweaks to the model structure
88e5896
@twallema
implementation of split prev_rest parameter for lockdown and relaxation
1640a6f
@twallema
calibration script
f5fb56f
@twallema
changes to calibration script
c0a2380
@twallema
calibration results
fcf4202
@twallema
vaccination function
af14281
@twallema
f_h func, seasonality func
26650e9
@twallema
works
4ad4bd5
@twallema
pandas datetime from policy function national model
9efb6ac
@twallema
ODE model
85e77cc
@twallema
clean up ODE models
3d4711b
@twallema
clean up SDE models
e6a0a57
@twallema
remove three beta's from spatial model
f7b961b
@twallema
belongs to previous
df0a7fa
@twallema
removes pandas from TDPF spatial
6d22e70
@twallema
calibration scripts
d53d0df
@twallema
scenario notebooks
31b7767
@twallema
calibration results
0c437a8
@twallema
update python version to 3.11
a545997
@twallema
update reference dictionary
4341ab1
@twallema
add nationally aggregated data in the estimation of spatial model
80a402c
@twallema
fix wrong abbreviation september in sciensano blood data
49244eb
@twallema
rearrange environment
13acfeb
@twallema
fix wrong data in sciensano blood sero data
643a1d1
@twallema
set limburg to 0.9
2d286d9
@twallema
incorporate pySODM changes
a9a55ec
@twallema
more inclusive TDPF
9b387c5
@twallema
update calibration provincial model
b7c0212
@twallema
plotfit/calibrate toestanden
084633e
@twallema
the vaccine incidences for some weird ass reason
52f11f4
@twallema
calibration results
908251d
@twallema
mky
975227c
@twallema
mkay?
64e52e7
@twallema twallema merged commit 1dfc7fd into UGentBiomath:master Oct 20, 2023
2 checks passed
@twallema twallema deleted the split-school-types branch October 20, 2023 16:31
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@twallema