Fixing startup issues when launched with gdb, or just in general

UO-OACISS · Dec 7, 2023 · ac0c49c · ac0c49c
1 parent 6a50109
commit ac0c49c
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Showing 2 changed files with 57 additions and 13 deletions.
diff --git a/src/apex/apex_preload.cpp b/src/apex/apex_preload.cpp
@@ -49,9 +49,24 @@ extern "C" {
 static int (*main_real)(int, char**, char**);
 
 int apex_preload_main(int argc, char** argv, char** envp) {
+    // FIRST! check to see if this is a bash script. if so, DO NOTHING
+    size_t len{strlen(argv[0])};
+    if (len > 4 && strncmp(argv[0] + (len - 4), "bash", 4)) {
+        return main_real(argc, argv, envp);
+    }
+    // FIRST! check to see if this is a [t]csh script. if so, DO NOTHING
+    if (len > 3 && strncmp(argv[0] + (len - 3), "csh", 3)) {
+        return main_real(argc, argv, envp);
+    }
+    // FIRST! check to see if this is gdb. if so, DO NOTHING (should get caught by the apex_exec script though)
+    if (len > 3 && strncmp(argv[0] + (len - 3), "gdb", 3)) {
+        return main_real(argc, argv, envp);
+    }
     // prevent re-entry
     static int _reentry = 0;
-    if(_reentry > 0) return -1;
+    if(_reentry > 0) {
+        return main_real(argc, argv, envp);
+    }
     _reentry = 1;
 
     int ret{0};

diff --git a/src/scripts/apex_exec b/src/scripts/apex_exec
@@ -628,33 +628,60 @@ fi
 echo_screen "APEX_LD_LIBRARY_PATH: ${APEX_LD_LIBRARY_PATH}"
 echo_screen "APEX_LD_PRELOAD: ${APEX_LD_PRELOAD}"
 
+if [ $debug = yes ] ; then
+    if [ "${myrank}" == "0" ] ; then
+        rm -f ./.gdbcmds
+    fi
+fi
+
 if [ $apple = 1 ]; then
-    export DYLD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}
-    export DYLD_INSERT_LIBRARIES=${APEX_LD_PRELOAD}
-    export DYLD_FORCE_FLAT_NAMESPACE=1
     if [ $debug = yes ] ; then
-        echo "_regexp-env DYLD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}" >> ./.gdbcmds
-        echo "_regexp-env DYLD_INSERT_LIBRARIES=${APEX_LD_PRELOAD}" >> ./.gdbcmds
-        echo "_regexp-env DYLD_FORCE_FLAT_NAMESPACE=1" >> ./.gdbcmds
-        debugger="lldb -s ./.gdbcmds --"
+        if [ "${myrank}" == "0" ] ; then
+            echo "_regexp-env DYLD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}" >> ./.gdbcmds
+            echo "_regexp-env DYLD_INSERT_LIBRARIES=${APEX_LD_PRELOAD}" >> ./.gdbcmds
+            echo "_regexp-env DYLD_FORCE_FLAT_NAMESPACE=1" >> ./.gdbcmds
         if [ $# -gt 1 ] ; then
             echo "settings set target.run-args ${*:2}" >> .gdb_commands
         fi
+        else
+            # Give rank 0 enough time to write the .gdbcmds file
+            until [ -f ./.gdbcmds ] ; do
+                sleep 1
+            done
+        fi
+        debugger="lldb -s ./.gdbcmds --"
+    else
+        export DYLD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}
+        export DYLD_INSERT_LIBRARIES=${APEX_LD_PRELOAD}
+        export DYLD_FORCE_FLAT_NAMESPACE=1
     fi
 else
-    export LD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}
-    export LD_PRELOAD=${APEX_LD_PRELOAD}
-    # Not sure if the DL auditor is necessary
-    #export LD_AUDIT=${APEX_LD_AUDIT}
     if [ $debug = yes ] ; then
+        if [ "${myrank}" == "0" ] ; then
         echo "set env LD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}" >> ./.gdbcmds
         echo "set env LD_PRELOAD=${APEX_LD_PRELOAD}" >> ./.gdbcmds
+        if [ $mpi = yes ]; then
+            echo "run" >> ./.gdbcmds
+            #echo "bt" >> ./.gdbcmds
+            echo "quit" >> ./.gdbcmds
+        fi
+        else
+            # Give rank 0 enough time to write the .gdbcmds file
+            until [ -f ./.gdbcmds ] ; do
+                sleep 1
+            done
+        fi
         #echo "set env LD_AUDIT=${APEX_LD_AUDIT}" >> ./.gdbcmds
         if [ $hip = yes ] ; then
             debugger="rocgdb -x ./.gdbcmds --args"
         else
             debugger="gdb -x ./.gdbcmds --args"
         fi
+    else
+        export LD_LIBRARY_PATH=${APEX_LD_LIBRARY_PATH}
+        export LD_PRELOAD=${APEX_LD_PRELOAD}
+        # Not sure if the DL auditor is necessary
+        #export LD_AUDIT=${APEX_LD_AUDIT}
     fi
 fi
 
@@ -733,7 +760,9 @@ else
     retval=$?
     unset LD_PRELOAD
     unset DYLD_INSERT_LIBRARIES
-    rm -f ./.gdbcmds
+    if [ "${myrank}" == "0" ] ; then
+        rm -f ./.gdbcmds
+    fi
     if [ ${retval} != 0 ] ; then
         echo "Error ${retval}!"
         count=`ldd ${MPI_LIB2} | grep -c tcmalloc`