[FIX] removes memory leak issue by removing c code and using numpy/scipy functions #47
Workflow file for this run
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| name: Build | |
| on: | |
| push: | |
| branches: | |
| - master | |
| tags: | |
| - "*" | |
| pull_request: | |
| branches: | |
| - master | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| # Extract metadata to allow for conditioning builds on commit messages | |
| job_metadata: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| commit_message: ${{ steps.get_commit_message.outputs.commit_message }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 2 | |
| - name: Print head git commit message | |
| id: get_commit_message | |
| run: | | |
| if [[ -z "$COMMIT_MSG" ]]; then | |
| COMMIT_MSG=$(git show -s --format=%s $REF) | |
| fi | |
| echo commit_message=$COMMIT_MSG | tee -a $GITHUB_OUTPUT | |
| env: | |
| COMMIT_MSG: ${{ github.event.head_commit.message }} | |
| REF: ${{ github.event.pull_request.head.sha }} | |
| build-sdist: | |
| name: Build sdist | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Build sdist | |
| run: pipx run build -s | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: sdist | |
| path: ./dist/*.tar.gz | |
| build-wheel: | |
| # Runs on tags and commits with "[build wheels]" in the message | |
| name: Build wheel for ${{ matrix.python }}-${{ matrix.buildplat[1] }} | |
| needs: [job_metadata, build-sdist] | |
| runs-on: ${{ matrix.buildplat[0] }} | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/') || contains(needs.job_metadata.outputs.commit_message, '[build wheels]') | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| buildplat: | |
| - [ubuntu-20.04, musllinux_x86_64] | |
| - [macos-12, macosx_*] | |
| - [windows-2019, win_amd64] | |
| python: ["cp38", "cp39", "cp310", "cp311", "cp312"] | |
| include: | |
| # Manylinux builds are cheap, do all in one | |
| - { buildplat: ["ubuntu-20.04", "manylinux_x86_64"], python: "*" } | |
| exclude: | |
| - buildplat: [ubuntu-20.04, musllinux_x86_64] | |
| python: "cp38" | |
| steps: | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| name: sdist | |
| path: ./dist | |
| - uses: actions/setup-python@v3 | |
| - name: Update pip/pipx | |
| run: pip install --upgrade pip pipx | |
| - name: Build wheel(s) | |
| run: pipx run cibuildwheel $( ls dist/*.tar.gz ) | |
| env: | |
| CIBW_BUILD: ${{ matrix.python }}-${{ matrix.buildplat[1] }} | |
| CIBW_TEST_REQUIRES: pytest | |
| CIBW_TEST_COMMAND: pytest --pyargs gradunwarp | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ matrix.python == '*' && 'all' || matrix.python }}-${{ startsWith(matrix.buildplat[1], 'macosx') && 'macosx' || matrix.buildplat[1] }} | |
| path: ./wheelhouse/*.whl | |
| test-sdist: | |
| name: Test sdist | |
| needs: [build-sdist] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| name: sdist | |
| path: ./dist | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3 | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Install sdist | |
| run: pip install dist/*.tar.gz | |
| - run: python -c 'from gradunwarp.core.globals import VERSION; print(VERSION)' | |
| - name: Install pytest | |
| run: pip install pytest | |
| - name: Run tests | |
| run: pytest -v --pyargs gradunwarp | |
| pre-publish: | |
| runs-on: ubuntu-latest | |
| needs: [test-sdist, build-wheel] | |
| steps: | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| path: dist/ | |
| - name: Check artifacts | |
| run: ls -lR | |
| - name: Consolidate and re-check | |
| run: | | |
| mv dist/*/*.{tar.gz,whl} dist | |
| rmdir dist/*/ | |
| ls -lR | |
| - run: pipx run twine check dist/* | |
| publish: | |
| runs-on: ubuntu-latest | |
| environment: "Package deployment" | |
| needs: [pre-publish] | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/') | |
| steps: | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| path: dist/ | |
| - name: Consolidate artifacts | |
| run: | | |
| mv dist/*/*.{tar.gz,whl} dist | |
| rmdir dist/*/ | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ |