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Add barcode logic to CytoSnake's CLI #46

Merged
merged 21 commits into from
May 9, 2023
Merged

Add barcode logic to CytoSnake's CLI #46

merged 21 commits into from
May 9, 2023

Commits on Mar 14, 2023

  1. fixed minor pathing bugs

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    axiomcura committed Mar 14, 2023
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Commits on Mar 28, 2023

  1. Merge branch 'WayScience:main' into main

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    axiomcura committed Mar 28, 2023
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Commits on Apr 12, 2023

  1. Merge branch 'WayScience:main' into main

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    axiomcura committed Apr 12, 2023
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Commits on Apr 25, 2023

  1. Merge branch 'WayScience:main' into main

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    axiomcura committed Apr 25, 2023
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Commits on May 4, 2023

  1. update workflow structure, added cp_process config

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    axiomcura committed May 4, 2023
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  2. added barcode logic

    @axiomcura
    axiomcura committed May 4, 2023
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Commits on May 5, 2023

  1. Update cytosnake/cli/cmd.py 

    Co-authored-by: Dave Bunten <ekgto445@gmail.com>
    @axiomcura @d33bs
    axiomcura and d33bs committed May 5, 2023
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  2. Update cytosnake/guards/input_guards.py 

    Co-authored-by: Dave Bunten <ekgto445@gmail.com>
    @axiomcura @d33bs
    axiomcura and d33bs committed May 5, 2023
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  3. Update cytosnake/guards/input_guards.py 

    Co-authored-by: Dave Bunten <ekgto445@gmail.com>
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    axiomcura and d33bs committed May 5, 2023
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  4. pre-commit update

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    axiomcura committed May 5, 2023
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  5. applied new versions of pre-commit workflow

    @axiomcura
    axiomcura committed May 5, 2023
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  6. created stubbed functional tests

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    axiomcura committed May 5, 2023
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Commits on May 6, 2023

  1. added dummy data for tests

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    axiomcura committed May 6, 2023
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Commits on May 7, 2023

  1. added testing framework

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    axiomcura committed May 7, 2023
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  2. applied ruff automatic fixing

    @axiomcura
    axiomcura committed May 7, 2023
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Commits on May 8, 2023

  1. fixed barcode logic bug

    @axiomcura
    axiomcura committed May 8, 2023
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  2. barcode logic tests

    @axiomcura
    axiomcura committed May 8, 2023
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  3. added workflow documentation

    @axiomcura
    axiomcura committed May 8, 2023
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  4. update workflow documentation

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    axiomcura committed May 8, 2023
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Commits on May 9, 2023

  1. Update cytosnake/tests/functional/test_cli.py 

    Co-authored-by: Dave Bunten <ekgto445@gmail.com>
    @axiomcura @d33bs
    axiomcura and d33bs committed May 9, 2023
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  2. applied comments

    @axiomcura
    axiomcura committed May 9, 2023
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