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Bump pycytominer from 1.1.0 to 1.2.1 #146

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@dependabot dependabot bot commented on behalf of github Dec 3, 2024

Bumps pycytominer from 1.1.0 to 1.2.1.

Release notes

Sourced from pycytominer's releases.

v1.2.1 (2024-11-20)

What's Changed

Full Changelog: cytomining/pycytominer@v1.2.0...v1.2.1

v1.2.0 (2024-09-30)

What's Changed

... (truncated)

Changelog

Sourced from pycytominer's changelog.

v1.2.1 (2024-11-20)

Detailed release notes

Fix

  • citation: fix citation.cff file formatting (#460)

Refactor

  • collate: deprecationwarning for collate (#462)

Build

  • python: add python 3.12 compatibility (#475)
  • python: bump minimum python version to 3.9 (#464)

CI

  • pre-commit: format pyproject.toml with pyproject-fmt (#453)
  • releases: constrain PyPI GitHub Actions release trigger types (#458)
  • dependencies: update setup python action dependencies and dependabot settings (#457)
  • dependabot: enable auto poetry updates (#463)

v1.2.0 (2024-09-30)

Detailed release notes

Feat

  • dev: add improved makefile with additional helper commands (#391)

Fix

  • pandas: add condition for pandas config (#415)
  • poetry: add tool.setuptools_scm section (#402)
  • ci: docker image push readme updates (#398, #395)
  • ci: fix errors with automated coverage (#432)
  • ci: add workspaceDir to git safe directories for devcontainers (#379)
  • SQLite: joins should be on ImageNumber, TableNumber, and not ImageNumber (#378)
  • compartments: avoid lowercase compartment strings (#421)

Refactor

  • pd: avoid dataframe fragmentation in agg (#407)
  • pandas: enable copy_on_write for pandas (#401)
  • bandit: apply bandit checks (#387)
  • isort: apply isort linting checks (#389)
  • ruff: update ruff to 0.3.4 (#386)
  • dev: add docker-in-docker feature to devcontainer (#381)

... (truncated)

Commits
  • 08f3a04 bump: version 1.2.0 -> 1.2.1 (#461)
  • 0388f50 build(deps): bump codecov/codecov-action from 4 to 5 (#478)
  • 505d1ce build(deps): bump aiohttp from 3.10.2 to 3.10.11 (#479)
  • 04607e6 refactor(collate): deprecationwarning for collate (#462)
  • cd13690 build(python): add python 3.12 compatibility (#475)
  • 6a8bb47 build(deps): bump sqlalchemy from 1.4.52 to 2.0.36; move to sqlalchemy.text f...
  • 83956c1 build(deps): bump the python-packages group across 1 directory with 13 update...
  • 3f82cc4 ci: exclude scipy, sqlachemy, pandas from groups updates (#471)
  • 3ca794a build(deps-dev): bump sphinx from 7.1.2 to 7.4.7 (#470)
  • d56df61 build(deps-dev): bump pre-commit from 3.5.0 to 4.0.1 (#468)
  • Additional commits viewable in compare view

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Bumps [pycytominer](https://github.com/cytomining/pycytominer) from 1.1.0 to 1.2.1.
- [Release notes](https://github.com/cytomining/pycytominer/releases)
- [Changelog](https://github.com/cytomining/pycytominer/blob/main/CHANGELOG.md)
- [Commits](cytomining/pycytominer@v1.1.0...v1.2.1)

---
updated-dependencies:
- dependency-name: pycytominer
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Dec 3, 2024
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dependabot bot commented on behalf of github Dec 3, 2024

Looks like pycytominer is up-to-date now, so this is no longer needed.

@dependabot dependabot bot closed this Dec 3, 2024
@dependabot dependabot bot deleted the dependabot/pip/pycytominer-1.2.1 branch December 3, 2024 00:49
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